Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3TXX4 | Slc17a7 | Vesicular glutamate transporter 1 (VGluT1) … | Mus musculus (Mouse) | 560 aa |
Protein Details: Q3TXX4 (Slc17a7)
Protein Information
| Accession | Q3TXX4 |
|---|---|
| Protein Names | Vesicular glutamate transporter 1 (VGluT1) (Brain-specific Na(+)-dependent inorganic phosphate cotransporter) (Solute carrier family 17 member 7) |
| Gene Symbol | Slc17a7 |
| Organism | Mus musculus (Mouse) |
| Length | 560 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEFRQEEFRK11LAGRALGRLH21RLLEKRQEGA31ETLELSADGR41PVTTHTRDPP
51-10051VVDCTCFGLP61RRYIIAIMSG71LGFCISFGIR81CNLGVAIVSM91VNNSTTHRGG
101-150101HVVVQKAQFN111WDPETVGLIH121GSFFWGYIVT131QIPGGFICQK141FAANRVFGFA
151-200151IVATSTLNML161IPSAARVHYG171CVIFVRILQG181LVEGVTYPAC191HGIWSKWAPP
201-250201LERSRLATTA211FCGSYAGAVV221AMPLAGVLVQ231YSGWSSVFYV241YGSFGIFWYL
251-300251FWLLVSYESP261ALHPSISEEE271RKYIEDAIGE281SAKLMNPVTK291FNTPWRRFFT
301-350301SMPVYAIIVA311NFCRSWTFYL321LLISQPAYFE331EVFGFEISKV341GLVSALPHLV
351-400351MTIIVPIGGQ361IADFLRSRHI371MSTTNVRKLM381NCGGFGMEAT391LLLVVGYSHS
401-450401KGVAISFLVL411AVGFSGFAIS421GFNVNHLDIA431PRYASILMGI441SNGVGTLSGM
451-500451VCPIIVGAMT461KHKTREEWQY471VFLIASLVHY481GGVIFYGVFA491SGEKQPWAEP
501-550501EEMSEEKCGF511VGHDQLAGSD521ESEMEDEAEP531PGAPPAPPPS541YGATHSTVQP
551-560551PRPPPPVRDY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 54 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.80
|
| 56 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.77
|
| 74 | - | - | - |
Deep-Palm: 0.48
|
|
| 81 | - | - | - |
Deep-Palm: 0.14
|
|
| 138 | - | - | - |
Deep-Palm: 0.17
|
|
| 171 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.67
|
|
| 190 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.67
|
|
| 212 | - | - | - |
Deep-Palm: 0.84
|
|
| 313 | - | - | - |
Deep-Palm: 0.04
|
|
| 382 | - | - | - |
Deep-Palm: 0.83
|
|
| 452 | - | - | - |
Deep-Palm: 0.55
|
|
| 508 | - | - | - |
Deep-Palm: 0.53
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Brain
Specificity: 0.139
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
31
Brain tissue (Mass)
Specificity: 0.861
31/56 (55.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.