Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3UHB1 | Nt5dc3 | 5'-nucleotidase domain-containing protein 3 (EC … | Mus musculus (Mouse) | 546 aa |
Protein Details: Q3UHB1 (Nt5dc3)
Protein Information
| Accession | Q3UHB1 |
|---|---|
| Protein Names | 5'-nucleotidase domain-containing protein 3 (EC 3.1.3.-) (GRP94-neighboring nucleotidase) |
| Gene Symbol | Nt5dc3 |
| Organism | Mus musculus (Mouse) |
| Length | 546 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35358180 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATVAAAARG11AGARAAAGLR21SCGGAVARER31PRSGCARRLC41SAPAAPAAVD
51-10051MKSYLWARYH61EAKRSTDELV71PSIMNNLLNP81DAIFSNNEMS91LSDIEIYGFD
101-150101YDYTLVFYSK111HLHTLIFNAA121RDLLINEHRY131PVEIRKYEYD141PSFAIRGLHY
151-200151DVQRAVLMKI161DAFHYIQMGT171VYRGLSVVPD181EEVIDMYEGS191HVPLEQMSDF
201-250201YGKSSHGNTM211KQFMDIFSLP221EMTLLSCVNE231HFLKNNIDYE241PVHLYKDVKD
251-300251SIRDVHIKGI261MYRAIEADIE271KYICYADQTR281AVLAKLAAHG291KKMFLITNSP
301-350301SSFVDKGMRY311IVGKDWRDLF321DVVIVQAEKP331NFFNDKRRPF341RKVNEKGVLL
351-400351WDKIHKLQKG361QIYKQGNLYE371FLKLTGWRGS381KVLYFGDHIY391SDLADLTLKH
401-450401GWRTGAIIPE411LRSELRIMNT421EQYIQTMTWL431QTLTGLLEQM441QVHRDAESQL
451-500451VLQEWKKERK461EMREMTKSFF471NAQFGSLFRT481DQNPTYFLRR491LSRFADIYMA
501-546501SLSCLLNYDV511HHTFYPRRTP521LQHELPAWSD531SPSAFKAPLL541QEAQAK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 22 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
|
| 35 | - | - | - |
Deep-Palm: 0.93
|
|
| 40 | - | - | - |
Deep-Palm: 0.90
|
|
| 227 | - | - | - |
Deep-Palm: 0.16
|
|
| 274 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 504 | - | - | - |
Deep-Palm: 0.48
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Brain
Specificity: 0.222
2/2 (100.0%)
1
Testis
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.667
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.