Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3UHB8 | Ccdc177 | Coiled-coil domain-containing protein 177 | Mus musculus (Mouse) | 706 aa |
Protein Details: Q3UHB8 (Ccdc177)
Protein Information
| Accession | Q3UHB8 |
|---|---|
| Protein Names | Coiled-coil domain-containing protein 177 |
| Gene Symbol | Ccdc177 |
| Organism | Mus musculus (Mouse) |
| Length | 706 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVDPVPEEEK11EGAEPGGSEG21DEATASEPPD31AQGAQQPAAS41SASASAAAPR
51-10051KAEVPCGAEG61GRREQSPLLH71LDLFNFACPE81AEGSRYVLTS91PRSLEACARC
101-150101AVKPVELLPR111ALADLVREAP121GRSMRVATGL131YEAYEAERLA141KLQQCRAERE
151-200151RIMREEKRRL161FTPKGPAAAP171ASASASASAS181ALSGGSSSSC191SSSSSLPASP
201-250201ASRVARRTSP211SPPARSRPPP221AGSRTGRKSH231SLDSLSRRRD241GALSSESGAS
251-300251SSSYSGESLR261ELRWPPRASA271RNSCPAGSAS281SAPNPLGRPS291ALALVPLTAR
301-350301SFSLGDLSHS311PQTAQHVERI321VRQVRAERGL331RGVPERDRKI341AALMLARHQE
351-400351ERLLLEQRAA361AHGQWEQQRV371RAEQRREREE381REKQRALERG391RRAWAAQVEE
401-450401RRGRRGREER411EAARRRQQQC421ERSEERRREL431AERQGLLRRE441RVERAARDDR
451-500451LRKLQQEQNL461KQREEGRQEG471RERAELVRRE481RAQRAARARE491RQEGQLQREK
501-550501RELSRAERAR511HEALLRGRVR521QQQEEREGLR531SSLEASLGRA541QENYEQLQEQ
551-600551RARELRERAR561REELQGRRAK571EAAERKEREH581QAHLEALARA591GERRLQHAAQ
601-650601VAEEAVQQKA611RRVVQTRLEK621ERAQRANKEK631VERDEDCRRR641ELLQAIGRKL
651-700651ERSEQLSRER661RSALESARST671ARASFHVREK681VREETNTRSF691DRMVREAQLH
701-706701ASLDRK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 56 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 78 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.85
Deep-Palm: 0.95
|
| 97 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.97
|
|
| 100 | - |
brain
(39008777)
| - |
Deep-Palm: 0.98
|
|
| 145 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.96
|
|
| 190 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.97
|
|
| 274 | - |
brain
(39008777)
| - |
Deep-Palm: 0.96
|
|
| 420 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.97
|
|
| 637 | - | - | - |
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain
Specificity: 0.500
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.500
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.