Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3UMB9 | Washc4 | WASH complex subunit 4 (WASH … | Mus musculus (Mouse) | 1173 aa |
Protein Details: Q3UMB9 (Washc4)
Protein Information
| Accession | Q3UMB9 |
|---|---|
| Protein Names | WASH complex subunit 4 (WASH complex subunit SWIP) |
| Gene Symbol | Washc4 |
| Organism | Mus musculus (Mouse) |
| Length | 1173 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 34884899 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVDTLSPDW11DFDRVDDGSQ21KIHAEVQLKN31YGRFLEEYTS41QLRRIEDALD
51-10051DLIGDVWDFN61LDPIALKLLP71YEQSSLLELI81KTENKVLNKV91ITVYAALCCE
101-150101IKKLKYEAET111KFYNGLLFYG121EGATDSSMVE131GDCQIQMGRF141VSFLQELSCF
151-200151VTRCYEVVMN161VIHQLAALYI171SNKIGPKIIE181TTGVHFQTMY191EHLGELLTVL
201-250201LTLDEIVDNH211VTLKDHWTMY221KRLLKSVHHN231PSKFGIQEEK241LKPFEKFLLK
251-300251LEGQLLDGMI261FQACIEQQFD271SLNGGISVSK281NSTFAEEFAH291SIRSIFANVE
301-350301AKLGEPSEID311QRDKYVGICG321LFVLHFQIFR331TVDKKFYKSL341LDICKKVPAI
351-400351TLTANIIWFP361DNFLIHKMPA371AAKLLDRKSL381QAIKIHRDTF391LQQKAQSLNK
401-450401DVQSYYVFVS411SWMMKMESML421SKEQRMDTFA431EDLTNRCNVF441IQGFLYAYSI
451-500451STIIKTTMNL461YMSMQKPMTK471TSVKALCRLI481ELLKAIEHMF491YRRSMVVADS
501-550501VSHITQHLQH511QALSSISVAK521KRVISDKKYS531EQRLDVLSAL541VLAENTLNGP
551-600551STKQRRLIVS561LALSVGTQMK571TFKDEELFPL581QVVMKKLDLI591SELRERVQAQ
601-650601CDCCFLYWHR611AVFPIYLDDV621YENAVDAARL631HYMFSALRDC641VPAMMHSRHL
651-700651ESHELLLDCY661DKEIMDILNE671HLLDKLCKEI681EKDLRLSVHT691HLKLDDRNPF
701-750701KVGRKDLALF711FSLNPIRFFN721RFIDIRAYVT731HYLDKTFYNL741TTVALHDWAT
751-800751YSEMRNLATQ761RYGLVMTEAH771LPSQTLEQGL781DVLEIMRNIH791IFVSRYLYNL
801-850801NNQIFIERTS811NNKHLNTINI821RHIANSIRTH831GTGIMNTTVN841FTYQFLKKKF
851-900851YIFSQFMYDE861HIKSRLIKDI871RFFREIKDQN881DHKYPFDRAE891KFNRGIRKLG
901-950901ITPEGQSYLD911QFRQLISQIG921NAMGYIRMIR931SGGLHCSSNA941IRFVPDLEDI
951-1000951VSFEELVKEE961GLAEETLRAA971RHLDSVLSDH981TRNSAEGTEY991FKMLVDVFAP
1001-10501001EFRRPKNIHL1011RNFYIIVPPL1021TLNFVEHSIS1031CKEKLNKKNK1041LGAAFTDDGF
1051-11001051AMGVAYTLKL1061LDQYQEFDSL1071HWFQSVREKY1081IKEIRAVAKQ1091QNVQSTSQDE
1101-11501101KLLQTMNLTQ1111KRLEVYLQEF1121ELLYFSLSSA1131RIFFRADKTA1141AEENQEKKEK
1151-11731151EEETKTSNGD1161GPESTVSADP1171VVK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 98 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.81
|
|
| 99 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.82
|
|
| 133 | - | - | - |
Deep-Palm: 0.49
|
|
| 149 | - | - | - |
Deep-Palm: 0.10
|
|
| 154 | - | - | - |
Deep-Palm: 0.28
|
|
| 264 | - | - | - |
Deep-Palm: 0.91
|
|
| 319 | - | - | - |
Deep-Palm: 0.56
|
|
| 344 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.92
|
|
| 437 | - | - | - |
Deep-Palm: 0.15
|
|
| 477 | - | - | - |
Deep-Palm: 0.92
|
|
| 601 | - | - | - |
Deep-Palm: 0.44
|
|
| 603 | - | - | - |
Deep-Palm: 0.31
|
|
| 604 | - | - | - |
Deep-Palm: 0.34
|
|
| 640 | - | - | - |
Deep-Palm: 0.69
|
|
| 659 | - | - | - |
Deep-Palm: 0.25
|
|
| 677 | - | - | - |
Deep-Palm: 0.92
|
|
| 936 | SWISSPALM DBPTM CYSMODDB | WASH complex subunit 7 |
liver
(26165157)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.84
|
| 1031 | - | - | - |
Deep-Palm: 0.89
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Liver
Specificity: 0.667
2/2 (100.0%)
1
Brain
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.