Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3V1Z5 | Rps4l | 40S ribosomal protein S4 | Mus musculus (Mouse) | 262 aa |
Protein Details: Q3V1Z5 (Rps4l)
Protein Information
| Accession | Q3V1Z5 |
|---|---|
| Protein Names | 40S ribosomal protein S4 |
| Gene Symbol | Rps4l |
| Organism | Mus musculus (Mouse) |
| Length | 262 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARGPKKHLK11RVAAPRHWML21DKLTGVFAPR31PSAGPHRLRE41CLPLAIFLRN
51-10051RLKYALTGDE61VKKICMQRLI71KVDGKVRTDV81AYPAGFMDVI91SIDKSGENFR
101-150101LVYDTKGRFA111VHRITPEEAK121YKLCKVRKVF131VGTKGIPHLV141THDARTIRYP
151-200151DPLIKVNDTV161QISLDSGKIT171DAIKFDTGNL181CMVTGGANLG191RIGVITNRER
201-250201HPGSFDVVHV211KDANGNGFAT221RLSNIFVIGK231GNKPWISLPR241GKGIRLTIAE
251-262251ERDKRLAAKQ261SG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 41 | Small ribosomal subunit protein eS4 RNA-binding S4 domain superfamily | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
|
| 65 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 124 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.85
|
|
| 181 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.88
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 0.095
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.905
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.