Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q3V3R4 | Itga1 | Integrin alpha-1 (CD49 antigen-like family … | Mus musculus (Mouse) | 1179 aa |
Protein Details: Q3V3R4 (Itga1)
Protein Information
| Accession | Q3V3R4 |
|---|---|
| Protein Names | Integrin alpha-1 (CD49 antigen-like family member A) (Laminin and collagen receptor) (VLA-1) (CD antigen CD49a) |
| Gene Symbol | Itga1 |
| Organism | Mus musculus (Mouse) |
| Length | 1179 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 34200797 34884899 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVPRRPASLE11VTVACIWLLT21VILGVCISFN31VDVKNSMSFS41GPVEDMFGYT
51-10051VQQYENEEGK61WVLIGSPLVG71QPKARTGDVY81KCPVGRERSM91PCVKLDLPVN
101-150101TSIPNVTEIK111ENMTFGSTLV121TNPKGGFLAC131GPLYAYRCGH141LHYTTGICSD
151-200151VSPTFQVVNS161FAPVQECSTQ171LDIVIVLDGS181NSIYPWESVT191AFLNDLLKRM
201-250201DIGPKQTQVG211IVQYGANVTH221EFNLNKYSST231EEVLVAANKI241GRRGGLQTMT
251-300251ALGIDTARKE261AFTEARGARR271GVKKVMVIVT281DGESHDNYRL291KQVIQDCEDE
301-350301NIQRFSIAIL311GHYNRGNLST321EKFVEEIKSI331ASEPTEKHFF341NVSDELALVT
351-400351IVKALGERIF361ALEATADQSA371ASFEMEMSQT381GFSAHYSQDW391VMLGAVGAYD
401-450401WNGTVVMQKA411NQIVIPHNTT421FQTEPTKMNE431PLASYLGYTV441NSATIPGDVL
451-500451YIAGQPRYNH461TGQVVIYKME471DGDVNILQTL481SGEQIGSYFG491SVLTTIDIDK
501-550501DSYTDLLLVG511APMYMGTEKE521EQGKVYVYAV531NQTRFEYQMS541LEPIKQTCCS
551-600551SLKDNSCTKE561NKNEPCGARF571GTAVAAVKDL581NVDGFNDVVI591GAPLEDDHAG
601-650601AVYIYHGSGK611TIRKEYAQRI621PSGGDGKTLK631FFGQSIHGEM641DLNGDGLTDV
651-700651TIGGLGGAAL661FWARDVAVVK671VTMNFEPNKV681NIQKKNCRVE691GKETVCINAT
701-750701MCFHVKLKSK711EDSVYEADLQ721YRVTLDSLRQ731ISRSFFSGTQ741ERRIQRNLTV
751-800751RESECIRHSF761YMLDKHDFQD771SVRVTLDFNL781TDPENGPVLD791DALPNSVHGH
801-850801IPFAKDCGNK811ERCVSDLTLD821VSTTEKNLLI831VRSQNDKFNV841SLTVKNKGDS
851-900851AYNTRTVVQY861SPNLIFSGIE871EIQKDSCESN881QNITCRVGYP891FLRTGDVVNF
901-950901KIIFQFNTSH911LSENAIIHLS921ATSDSEEPLE931SLYDNEVNIS941IPVKYEVGLQ
951-1000951FYSSASEHHI961SVAANETVPE971LINSTKDIGD981EINVFYTIRK991RGHFPMPELR
1001-10501001LAISFPNLTS1011DGYPVLYPTG1021WSSSDNVNCR1031PRSLEDPLGI1041NSGKKMTISK
1051-11001051SEVLKRGTIQ1061DCSTCKIATI1071TCHLLPSDVS1081QVNVSLILWK1091PTFIKAHFSS
1101-11501101LNLTIRGELQ1111SENSSLTLSS1121SNRKRELAIQ1131ISKDGLPGRV1141PLWVILLSAF
1151-11791151AGLLLLMLLI1161LALWKIGFFK1171RPLKKKMEK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 15 | - | - | - |
Deep-Palm: 0.85
|
|
| 26 | - | - | - |
Deep-Palm: 0.57
|
|
| 82 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.94
|
| 92 | - | - | - |
Deep-Palm: 0.56
|
|
| 130 | - | - | - |
Deep-Palm: 0.90
|
|
| 138 | - | - | - |
Deep-Palm: 0.44
|
|
| 148 | - | - | - |
Deep-Palm: 0.12
|
|
| 167 | - | - | - |
Deep-Palm: 0.22
|
|
| 297 | - | - | - |
Deep-Palm: 0.34
|
|
| 548 | - | - | - |
Deep-Palm: 0.15
|
|
| 549 | - | - | - |
Deep-Palm: 0.15
|
|
| 557 | - | - | - |
Deep-Palm: 0.14
|
|
| 566 | - | - | - |
Deep-Palm: 0.51
|
|
| 687 | - | - | - |
Deep-Palm: 0.08
|
|
| 696 | - | - | - |
Deep-Palm: 0.33
|
|
| 702 | - | - | - |
Deep-Palm: 0.59
|
|
| 755 | - | - | - |
Deep-Palm: 0.24
|
|
| 807 | - | - | - |
Deep-Palm: 0.53
|
|
| 813 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.47
|
| 877 | - | - | - |
Deep-Palm: 0.16
|
|
| 885 | - | - | - |
Deep-Palm: 0.35
|
|
| 1029 | - | - | - |
Deep-Palm: 0.60
|
|
| 1062 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.80
|
|
| 1065 | - | - | - |
Deep-Palm: 0.76
|
|
| 1072 | - | - | - |
Deep-Palm: 0.38
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Brain
Specificity: 0.500
2/2 (100.0%)
1
NSC
Specificity: 0.250
1/1 (100.0%)
1
Liver
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.