Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q5JRR6 | UBA1 | E1 ubiquitin-activating enzyme (EC 6.2.1.45) | Homo sapiens (Human) | 506 aa |
Protein Details: Q5JRR6 (UBA1)
Protein Information
| Accession | Q5JRR6 |
|---|---|
| Protein Names | E1 ubiquitin-activating enzyme (EC 6.2.1.45) |
| Gene Symbol | UBA1 |
| Organism | Homo sapiens (Human) |
| Length | 506 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29575903 31251020 36430497 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGFHHVGQAG11LEPLTSGDPS21ALASQSAGIT31GVSYCAWPGF41SIEVGEWGRL
51-10051EGFPTSRVAV61RLVLALFTDG71PSNNACGNPF81CQLWPHVICL91LCLQWARDEF
101-150101EGLFKQPAEN111VNQYLTDPKF121VERTLRLAGT131QPLEVLEAVQ141RSLVLQRPQT
151-200151WADCVTWACH161HWHTQYSNNI171RQLLHNFPPD181QLTSSGAPFW191SGPKRCPHPL
201-250201TFDVNNPLHL211DYVMAAANLF221AQTYGLTGSQ231DRAAVATFLQ241SVQVPEFTPK
251-300251SGVKIHVSDQ261ELQSANASVD271DSRLEELKAT281LPSPDKLPGF291KMYPIDFEKD
301-350301DDSNFHMDFI311VAASNLRAEN321YDIPSADRHK331SKLIAGKIIP341AIATTTAAVV
351-400351GLVCLELYKV361VQGHRQLDSY371KNGFLNLALP381FFGFSEPLAA391PRHQYYNQEW
401-450401TLWDRFEVQG411LQPNGEEMTL421KQFLDYFKTE431HKLEITMLSQ441GVSMLYSFFM
451-500451PAAKLKERLD461QPMTEIVSRV471SKRKLGRHVR481ALVLELCCND491ESGEDVEVPY
501-506501VRYTIR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 35 | - | - | - |
Deep-Palm: 0.95
|
|
| 76 | - | - | - |
Deep-Palm: 0.23
|
|
| 81 | - | - | - |
Deep-Palm: 0.04
|
|
| 89 | - | - | - |
Deep-Palm: 0.12
|
|
| 92 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.20
|
|
| 154 | - | - | - |
Deep-Palm: 0.05
|
|
| 159 | - | - | - |
Deep-Palm: 0.05
|
|
| 196 | - | - |
Unknown
(32651440)
|
Deep-Palm: 0.49
|
|
| 354 | SWISSPALM DBPTM CYSMODDB | - | - |
Unknown
(32651440)
|
GPS-Palm: 0.84
Deep-Palm: 0.94
|
| 487 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 488 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.444
4
LNCaP
Specificity: 0.444
4/4 (100.0%)
4
cerebral cortex
Specificity: 0.444
4/4 (100.0%)
1
HeLa cell
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.