Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q5QGU6 | Rtp3 | Receptor-transporting protein 3 (Transmembrane protein … | Mus musculus (Mouse) | 474 aa |
Protein Details: Q5QGU6 (Rtp3)
Protein Information
| Accession | Q5QGU6 |
|---|---|
| Protein Names | Receptor-transporting protein 3 (Transmembrane protein 7) |
| Gene Symbol | Rtp3 |
| Organism | Mus musculus (Mouse) |
| Length | 474 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MMEEDIGDTE11QWRHVFQELM21QEVKPWHKWT31LIPDKNLLPN41VLKPGWTQYQ
51-10051QKTFARFHCP61SCSRSWASGR71VLIVFHMRWC81EKKAKGWVKM91RVFAQRCNQC
101-150101PEPPFATPEV111TWDNISRILN121NLLFQILKKC131YKEGFKQMGE141IPLLGNTSLE
151-200151GPHDSSNCEA161CLLGFCAQND171LGQASKPPAP181PLSPTSSKSA191REPKVTVTCS
201-250201NISSSRPSSK211VQMPQASKVN221PQASNPTKND231PKVSCTSKPP241APPLSPTSLK
251-300251SAREPKVTVT261CSNISSSRPS271SKVQMPQASK281VNPQTSNPTK291NDPKISCTSK
301-350301PSTTPRLTIQ311QLSVVSPPAP321APTCVIQMPS331PTPIDGSRAA341DVAKENTRSK
351-400351TPKALLSSPL361YVPPTSSYVP371PTSSYVPPTS381SYVPPTSSYV391PPTSSSVIVP
401-450401ISSSWRLPEN411TICQVERNSH421IHPQSQSSCC431GACCESWCEI441FRYSCCEAAC
451-474451NCMSQSPLCC461LAFLILFLLL471WYLL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 59 | - | - | - |
Deep-Palm: 0.08
|
|
| 62 | - | - | - |
Deep-Palm: 0.05
|
|
| 80 | - | - | - |
Deep-Palm: 0.71
|
|
| 97 | - | - | - |
Deep-Palm: 0.47
|
|
| 100 | - | - | - |
Deep-Palm: 0.06
|
|
| 130 | - | - | - |
Deep-Palm: 0.95
|
|
| 158 | - | - | - |
Deep-Palm: 0.82
|
|
| 161 | - | - | - |
Deep-Palm: 0.62
|
|
| 166 | - | - | - |
Deep-Palm: 0.45
|
|
| 199 | - | - | - |
Deep-Palm: 0.86
|
|
| 235 | - | - | - |
Deep-Palm: 0.80
|
|
| 261 | - | - | - |
Deep-Palm: 0.89
|
|
| 297 | - | - | - |
Deep-Palm: 0.39
|
|
| 324 | - | - | - |
Deep-Palm: 0.62
|
|
| 413 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.30
|
| 429 | - | - | - |
Deep-Palm: 0.06
|
|
| 430 | - | - | - |
Deep-Palm: 0.05
|
|
| 433 | - | - | - |
Deep-Palm: 0.04
|
|
| 434 | - | - | - |
Deep-Palm: 0.05
|
|
| 438 | - | - | - |
Deep-Palm: 0.04
|
|
| 445 | - | - | - |
Deep-Palm: 0.03
|
|
| 446 | - | - | - |
Deep-Palm: 0.03
|
|
| 450 | - | - | - |
Deep-Palm: 0.08
|
|
| 452 | - | - | - |
Deep-Palm: 0.09
|
|
| 459 | - | - | - |
Deep-Palm: 0.60
|
|
| 460 | - | - | - |
Deep-Palm: 0.59
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Liver
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.