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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q5ST81 TUBB Tubulin beta chain Homo sapiens (Human) 372 aa

Protein Details: Q5ST81 (TUBB)

Protein Information
Accession Q5ST81
Protein Names Tubulin beta chain
Gene Symbol TUBB
Organism Homo sapiens (Human)
Length 372 aa
Isoforms No isoforms
Related PMIDs 21076176 29575903 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.783
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
36
LNCaP cells
Specificity: 0.783
36/46 (78.3%)
6
Jurkat T cells
Specificity: 0.130
6/25 (24.0%)
4
PC3 cells
Specificity: 0.087
4/4 (100.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDSVRSGPFG11QIFRPDNFVF21GQSGAGNNWA31KGHYTEGAEL41VDSVLDVVRK
51-10051EAESCDCLQG61FQLTHSLGGG71TGSGMGTLLI81SKIREEYPDR91IMNTFSVVPS
101-150101PKVSDTVVEP111YNATLSVHQL121VENTDETYCI131DNEALYDICF141RTLKLTTPTY
151-200151GDLNHLVSAT161MSGVTTCLRF171PGQLNADLRK181LAVNMVPFPR191LHFFMPGFAP
201-250201LTSRGSQQYR211ALTVPELTQQ221VFDAKNMMAA231CDPRHGRYLT241VAAVFRGRMS
251-300251MKEVDEQMLN261VQNKNSSYFV271EWIPNNVKTA281VCDIPPRGLK291MAVTFIGNST
301-350301AIQELFKRIS311EQFTAMFRRK321AFLHWYTGEG331MDEMEFTEAE341SNMNDLVSEY
351-372351QQYQDATAEE361EEDFGEEAEE371EA
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
55 Prediction (Low) - -
139 Prediction (Medium) - -
167 Prediction (High) - -
231 Prediction (High) - -
282 Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) Tubulin C-terminal domain 29575903
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
233 M → Cfs*14 0.002976 DEL Frame Shift Del KIRC
251 R → C 0.001887 SNP Missense Mutation UCEC