Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q5T0R7 | CAP1 | Cyclase associated actin cytoskeleton regulatory … | Homo sapiens (Human) | 174 aa |
Protein Details: Q5T0R7 (CAP1)
Protein Information
| Accession | Q5T0R7 |
|---|---|
| Protein Names | Cyclase associated actin cytoskeleton regulatory protein 1 |
| Gene Symbol | CAP1 |
| Organism | Homo sapiens (Human) |
| Length | 174 aa |
| Isoforms | No isoforms |
| Related PMIDs | 32944167 36430497 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADMQNLVER11LERAVGRLEA21VSHTSDMHRG31YADSPSKAGA41APYVQAFDSL
51-10051LAGPVAEYLK61ISKEIGGDVQ71KHAEMVHTGL81KLERALLVTA91SQCQQPAENK
101-150101LSDLLAPISE111QIKEVITFRE121KNRGSKLFNH131LSAVSESIQA141LGWVAMAPKP
151-174151GPYVKEMNDA161AMFYTNRVLK171EYKD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 93 | SWISSPALM DBPTM CYSMODDB | CAP N-terminal domain | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.89
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
cerebral cortex
Specificity: 0.571
4/4 (100.0%)
3
PC3
Specificity: 0.429
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 43 | Y → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 236 | C → C | 0.002141 | SNP | Silent | SKCM |