Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q5T8U3 | RPL7A | 60S ribosomal protein L7a | Homo sapiens (Human) | 191 aa |
Protein Details: Q5T8U3 (RPL7A)
Protein Information
| Accession | Q5T8U3 |
|---|---|
| Protein Names | 60S ribosomal protein L7a |
| Gene Symbol | RPL7A |
| Organism | Homo sapiens (Human) |
| Length | 191 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 32944167 36430497 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLVRLNVRCS11CRGVVLGGCR21KLLASLVQPK31GKKAKGKKVA41PAPAVVKKQE
51-10051AKKVVNPLFE61KRPKNFGIGQ71DIQPKRDLTR81FVKWPRYIRL91QRQRAILYKR
101-150101LKVPPAINQF111TQALDRQTAT121QLLKLAHKYR131PETKQEKKQR141LLARAEKKAA
151-191151GKGDVPTKRP161PVLRAGVNTV171TTLVENKKAQ181LVVIAHDVDP191I
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.15
|
|
| 11 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.24
|
|
| 19 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.375
3
PC3
Specificity: 0.375
3/3 (100.0%)
2
LNCaP
Specificity: 0.250
2/2 (100.0%)
2
cerebral cortex
Specificity: 0.250
2/2 (100.0%)
1
U937 cell
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 175 | R → C | 0.002288 | SNP | Missense Mutation | STAD |