Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q5U458 | Dnajc11 | DnaJ homolog subfamily C member … | Mus musculus (Mouse) | 559 aa |
Protein Details: Q5U458 (Dnajc11)
Protein Information
| Accession | Q5U458 |
|---|---|
| Protein Names | DnaJ homolog subfamily C member 11 |
| Gene Symbol | Dnajc11 |
| Organism | Mus musculus (Mouse) |
| Length | 559 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 31772009 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATALSEEEL11DNEDYYSLLN21VRREASSEEL31KAAYRRLCML41YHPDKHRDPE
51-10051LKSQAERLFN61LVHQAYEVLS71DPQTRAIYDI81YGKRGLEMEG91WEVVERKRTP
101-150101AEIREEFERL111QREREERRLQ121QRTNPKGTIS131VGVDATDLFD141RYDEEYEDVS
151-200151GSGFPQIEIN161KMHISQSIEA171PLTATDTAIL181SGSLSTQNGN191GGGSVNFALR
201-250201RVTSAKGWGE211LEFGAGDLQG221PLFGLKLFRN231LTPRCFVTTN241CALQFSSRGI
251-300251RPGLTTVLAR261NLDKNTVGYL271QWRWGIQSAM281NTSIVRDTKT291CHFTVALQLG
301-350301IPHSFALISY311QHKFQDDDQT321RVKGSLKAGF331FGTIVEYGAE341RKISRHSVLG
351-400351AAVSIGVPQG361VSLKVKLNRA371SQTYFFPIHL381TDQLLPSAVF391YATVGPLVVY
401-450401LAVHRLIIRP411YLRAQKEKEL421EKQRENTASD431ILQKKQEAEA441AVRLMQESVR
451-500451RIIEAEESRM461GLIIVNAWYG471KFVNDKSRKN481EKVKVIDVTV491PLQCLVKDSK
501-550501LILTEASKAG511LPGFYDPCVG521EEKSLRVLYQ531FRGVLHQVMV541PDSEALRIPK
551-559551QSHRIDTDG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 38 | DnaJ domain Chaperone J-domain superfamily Mitochondrial inner membrane organizing protein | - | - |
Deep-Palm: 0.96
|
|
| 235 | - | - | - |
Deep-Palm: 0.89
|
|
| 241 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.87
|
| 291 | - | - | - |
Deep-Palm: 0.47
|
|
| 494 | SWISSPALM DBPTM CYSMODDB | DnaJ-like protein C11 C-terminal |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.98
|
| 518 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.429
6
Liver
Specificity: 0.273
6/6 (100.0%)
5
Brain
Specificity: 0.227
5/5 (100.0%)
2
Testis
Specificity: 0.091
2/2 (100.0%)
1
NSC
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
8
Brain tissue (Mass)
Specificity: 0.364
8/56 (14.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.