Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q5U4D8 | Slc5a6 | Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin … | Mus musculus (Mouse) | 634 aa |
Protein Details: Q5U4D8 (Slc5a6)
Protein Information
| Accession | Q5U4D8 |
|---|---|
| Protein Names | Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter) (Solute carrier family 5 member 6) |
| Gene Symbol | Slc5a6 |
| Organism | Mus musculus (Mouse) |
| Length | 634 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSVASTAAPF11HTTSGSSGAI21STFSVVDYVV31FGLLLVLSLV41IGLYHACRGW
51-10051GHHTVGELLM61ADRKMGCLPV71ALSLLATFQS81AVAILGAPAE91IFRFGTQYWF
101-150101LGCSYFLGLL111IPAHIFIPVF121YRLHLTSAYE131YLELRFNKAV141RICGTVTFIF
151-200151QMVIYMGVAL161YAPSLALNAV171TGFDLWLSVL181ALGIVCNIYT191ALGGLKAVIW
201-250201TDVFQTLVMF211LGQLVVIIVG221AARVGGLGHV231WNVTSQHGLI241SGINLDPDPF
251-300251VRHTFWTLAF261GGVFMMLSLY271GVNQAQVQRY281LSSHSERAAV291LSCYAVFPCQ
301-350301QVALCMSCLI311GLVMFAYYNM321YSMSPELKQA331APDQLVLYFV341MDLLKDMPGL
351-400351PGLFVACLFS361GSLSTISSAF371NSLATVTMED381LIQPWFPQLT391ETRAIMLSRG
401-450401LAFAYGLVCL411GMAYISSHLG421SVLQAALSIF431GMVGGPLLGL441FCLGLFFPCA
451-500451NPLGAIVGLL461TGLTMAFWIG471IGSIVSRMSS481AVAPPPLNGS491SSFLPANVTV
501-550501AAVTTVMPST511LSKPTGLQHF521YSLSYLWYSA531HNSTTVIVVG541LIVSLLTGGM
551-600551RGRSLNPGTI561YPVLPKLLAL571LPLSCQKRLC581WRSHSQDIPV591IPNLFPEKMR
601-634601NGVLQDSTDK611ERMAEDGLVH621QPCSPTYVVQ631ETSL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 47 | Sodium:Solute Symporter (SSF) | - | - |
Deep-Palm: 0.98
|
|
| 67 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.97
|
|
| 103 | - | - | - |
Deep-Palm: 0.50
|
|
| 143 | - | - | - |
Deep-Palm: 0.69
|
|
| 186 | - | - | - |
Deep-Palm: 0.96
|
|
| 293 | - | - | - |
Deep-Palm: 0.64
|
|
| 299 | - | - | - |
Deep-Palm: 0.73
|
|
| 305 | - | - | - |
Deep-Palm: 0.09
|
|
| 308 | - | - | - |
Deep-Palm: 0.05
|
|
| 357 | - | - | - |
Deep-Palm: 0.79
|
|
| 409 | - | - | - |
Deep-Palm: 0.92
|
|
| 442 | - | - | - |
Deep-Palm: 0.90
|
|
| 449 | - | - | - |
Deep-Palm: 0.94
|
|
| 575 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.98
|
| 580 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
|
| 623 | - | - | - |
Deep-Palm: 0.11
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
Liver
Specificity: 0.250
1/1 (100.0%)
1
Brain
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain tissue (Mass)
Specificity: 0.500
2/56 (3.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.