Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60597-2 | Ogdh | 2-oxoglutarate dehydrogenase complex component E1 … | Mus musculus (Mouse) | 1013 aa |
Protein Details: Q60597-2 (Ogdh)
Protein Information
| Accession | Q60597-2 |
|---|---|
| Protein Names | 2-oxoglutarate dehydrogenase complex component E1 (E1o) (OGDC-E1) (OGDH-E1) (EC 1.2.4.2) (2-oxoglutarate dehydrogenase, mitochondrial) (Alpha-ketoglutarate dehydrogenase) (Alpha-KGDH-E1) (Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase) |
| Gene Symbol | Ogdh |
| Organism | Mus musculus (Mouse) |
| Length | 1013 aa |
| Isoforms | |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFHLRTCAAK11LRPLTASQTV21KTFSQNKPAA31IRTFQQIRCY41SAPVAAEPFL
51-10051SGTSSNYVEE61MYCAWLENPK71SVHKSWDIFF81RNTNAGAPPG91TAYQSPLSLS
101-150101RSSLATMAHA111QSLVEAQPNV121DKLVEDHLAV131QSLIRAYQVR141GHHIAKSCVN
151-200151FDDAPVTVSS161NVGFYGLHES171DLDKVFHLPT181TTFIGGQEPA191LPLREIIRRL
201-250201EMAYCQHIGV211EFMFINDLEQ221CQWIRQKFET231PGIMQFTNEE241KRTLLARLVR
251-300251STRFEEFLQR261KWSSEKRFGL271EGCEVLIPAL281KTIIDMSSAN291GVDYVIMGMP
301-350301HRGRLNVLAN311VIRKELEQIF321CQFDSKLEAA331DEGSGDMKYH341LGMYHRRINR
351-400351VTDRNITLSL361VANPSHLEAA371DPVVMGKTKA381EQFYCGDTEG391KKVMSILLHG
401-450401DAAFAGQGIV411YETFHLSDLP421SYTTHGTVHV431VVNNQIGFTT441DPRMARSSPY
451-500451PTDVARVVNA461PIFHVNSDDP471EAVMYVCKVA481AEWRNTFHKD491VVVDLVCYRR
501-550501NGHNEMDEPM511FTQPLMYKQI521RKQKPVLQKY531AELLVSQGVV541NQPEYEEEIS
551-600551KYDKICEEAF561TRSKDEKILH571IKHWLDSPWP581GFFTLDGQPR591SMTCPSTGLE
601-650601EDVLFHIGKV611ASSVPVENFT621IHGGLSRILK631TRRELVTNRT641VDWALAEYMA
651-700651FGSLLKEGIH661VRLSGQDVER671GTFSHRHHVL681HDQNVDKRTC691IPMNHLWPNQ
701-750701APYTVCNSSL711SEYGVLGFEL721GFAMASPNAL731VLWEAQFGDF741NNMAQCIIDQ
751-800751FICPGQAKWV761RQNGIVLLLP771HGMEGMGPEH781SSARPERFLQ791MCNDDPDVLP
801-850801DLQEENFDIN811QLYDCNWIVV821NCSTPGNFFH831VLRRQILLPF841RKPLIVFTPK
851-900851SLLRHPEART861SFDEMLPGTH871FQRVIPENGP881AAQDPHKVKR891LLFCTGKVYY
901-950901DLTRERKARN911MEEEVAITRI921EQLSPFPFDL931LLKEAQKYPN941AELAWCQEEH
951-1000951KNQGYYDYVK961PRLRTTIDRA971KPVWYAGRDP981AAAPATGNKK991THLTELQRFL
1001-10131001DTAFDLDAFK1011KFS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 39 | - | - | - |
Deep-Palm: 0.84
|
|
| 63 | - | - | - |
Deep-Palm: 0.09
|
|
| 148 | - | - | - |
Deep-Palm: 0.44
|
|
| 205 | - | - | - |
Deep-Palm: 0.71
|
|
| 221 | - | - | - |
Deep-Palm: 0.05
|
|
| 273 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.96
|
|
| 321 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 385 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 477 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.11
|
|
| 497 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.26
|
|
| 556 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.59
|
|
| 594 | - |
Forebrain
(28680068)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 690 | - | - | - |
Deep-Palm: 0.04
|
|
| 706 | - | - | - |
Deep-Palm: 0.58
|
|
| 746 | - | - | - |
Deep-Palm: 0.10
|
|
| 753 | - | - | - |
Deep-Palm: 0.12
|
|
| 792 | - | - | - |
Deep-Palm: 0.74
|
|
| 815 | - | - | - |
Deep-Palm: 0.03
|
|
| 822 | - | - | - |
Deep-Palm: 0.08
|
|
| 894 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 946 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
16
Brain tissue (Mass)
Specificity: 1.000
16/56 (28.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.