Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60597-3 | Ogdh | 2-oxoglutarate dehydrogenase complex component E1 … | Mus musculus (Mouse) | 1038 aa |
Protein Details: Q60597-3 (Ogdh)
Protein Information
| Accession | Q60597-3 |
|---|---|
| Protein Names | 2-oxoglutarate dehydrogenase complex component E1 (E1o) (OGDC-E1) (OGDH-E1) (EC 1.2.4.2) (2-oxoglutarate dehydrogenase, mitochondrial) (Alpha-ketoglutarate dehydrogenase) (Alpha-KGDH-E1) (Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase) |
| Gene Symbol | Ogdh |
| Organism | Mus musculus (Mouse) |
| Length | 1038 aa |
| Isoforms | |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFHLRTCAAK11LRPLTASQTV21KTFSQNKPAA31IRTFQQIRCY41SAPVAAEPFL
51-10051SGTSSNYVEE61MYCAWLENPK71SVHKSWDIFF81RNTNAGAPPG91TAYQSPLSLS
101-150101RSSLATMAHA111QSLVEAQPNV121DKLVEDHLAV131QSLIRAYQIR141GHHVAQLDPL
151-200151GILDADLDSS161VPADIISSTD171KLDLAVFKER181LRMLTVGGFY191GLHESDLDKV
201-250201FHLPTTTFIG211GQEPALPLRE221IIRRLEMAYC231QHIGVEFMFI241NDLEQCQWIR
251-300251QKFETPGIMQ261FTNEEKRTLL271ARLVRSTRFE281EFLQRKWSSE291KRFGLEGCEV
301-350301LIPALKTIID311MSSANGVDYV321IMGMPHRGRL331NVLANVIRKE341LEQIFCQFDS
351-400351KLEAADEGSG361DMKYHLGMYH371RRINRVTDRN381ITLSLVANPS391HLEAADPVVM
401-450401GKTKAEQFYC411GDTEGKKVMS421ILLHGDAAFA431GQGIVYETFH441LSDLPSYTTH
451-500451GTVHVVVNNQ461IGFTTDPRMA471RSSPYPTDVA481RVVNAPIFHV491NSDDPEAVMY
501-550501VCKVAAEWRN511TFHKDVVVDL521VCYRRNGHNE531MDEPMFTQPL541MYKQIRKQKP
551-600551VLQKYAELLV561SQGVVNQPEY571EEEISKYDKI581CEEAFTRSKD591EKILHIKHWL
601-650601DSPWPGFFTL611DGQPRSMTCP621STGLEEDVLF631HIGKVASSVP641VENFTIHGGL
651-700651SRILKTRREL661VTNRTVDWAL671AEYMAFGSLL681KEGIHVRLSG691QDVERGTFSH
701-750701RHHVLHDQNV711DKRTCIPMNH721LWPNQAPYTV731CNSSLSEYGV741LGFELGFAMA
751-800751SPNALVLWEA761QFGDFNNMAQ771CIIDQFICPG781QAKWVRQNGI791VLLLPHGMEG
801-850801MGPEHSSARP811ERFLQMCNDD821PDVLPDLQEE831NFDINQLYDC841NWIVVNCSTP
851-900851GNFFHVLRRQ861ILLPFRKPLI871VFTPKSLLRH881PEARTSFDEM891LPGTHFQRVI
901-950901PENGPAAQDP911HKVKRLLFCT921GKVYYDLTRE931RKARNMEEEV941AITRIEQLSP
951-1000951FPFDLLLKEA961QKYPNAELAW971CQEEHKNQGY981YDYVKPRLRT991TIDRAKPVWY
1001-10381001AGRDPAAAPA1011TGNKKTHLTE1021LQRFLDTAFD1031LDAFKKFS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 39 | - | - | - |
Deep-Palm: 0.84
|
|
| 63 | - | - | - |
Deep-Palm: 0.09
|
|
| 230 | - | - | - |
Deep-Palm: 0.70
|
|
| 246 | - | - | - |
Deep-Palm: 0.05
|
|
| 298 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.96
|
|
| 346 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 410 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 502 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.11
|
|
| 522 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.26
|
|
| 581 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.59
|
|
| 619 | - |
Forebrain
(28680068)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 715 | - | - | - |
Deep-Palm: 0.04
|
|
| 731 | - | - | - |
Deep-Palm: 0.59
|
|
| 771 | - | - | - |
Deep-Palm: 0.11
|
|
| 778 | - | - | - |
Deep-Palm: 0.13
|
|
| 817 | - | - | - |
Deep-Palm: 0.74
|
|
| 840 | - | - | - |
Deep-Palm: 0.03
|
|
| 847 | - | - | - |
Deep-Palm: 0.08
|
|
| 919 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 971 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 0.059
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
16
Brain tissue (Mass)
Specificity: 0.941
16/56 (28.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.