Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60597-4 | Ogdh | 2-oxoglutarate dehydrogenase complex component E1 … | Mus musculus (Mouse) | 1034 aa |
Protein Details: Q60597-4 (Ogdh)
Protein Information
| Accession | Q60597-4 |
|---|---|
| Protein Names | 2-oxoglutarate dehydrogenase complex component E1 (E1o) (OGDC-E1) (OGDH-E1) (EC 1.2.4.2) (2-oxoglutarate dehydrogenase, mitochondrial) (Alpha-ketoglutarate dehydrogenase) (Alpha-KGDH-E1) (Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase) |
| Gene Symbol | Ogdh |
| Organism | Mus musculus (Mouse) |
| Length | 1034 aa |
| Isoforms | |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFHLRTCAAK11LRPLTASQTV21KTFSQNKPAA31IRTFQQIRCY41SAPVAAEPFL
51-10051SGTSSNYVEE61MYCAWLENPK71SVHKSWDIFF81RNTNAGAPPG91TAYQSPLSLS
101-150101RSSLATMAHA111QSLVEAQPNV121DKLVEDHLAV131QSLIRAYQVR141GHHIAKLDPL
151-200151GISCVNFDDA161PVTVSSNVDL171AVFKERLRML181TVGGFYGLHE191SDLDKVFHLP
201-250201TTTFIGGQEP211ALPLREIIRR221LEMAYCQHIG231VEFMFINDLE241QCQWIRQKFE
251-300251TPGIMQFTNE261EKRTLLARLV271RSTRFEEFLQ281RKWSSEKRFG291LEGCEVLIPA
301-350301LKTIIDMSSA311NGVDYVIMGM321PHRGRLNVLA331NVIRKELEQI341FCQFDSKLEA
351-400351ADEGSGDMKY361HLGMYHRRIN371RVTDRNITLS381LVANPSHLEA391ADPVVMGKTK
401-450401AEQFYCGDTE411GKKVMSILLH421GDAAFAGQGI431VYETFHLSDL441PSYTTHGTVH
451-500451VVVNNQIGFT461TDPRMARSSP471YPTDVARVVN481APIFHVNSDD491PEAVMYVCKV
501-550501AAEWRNTFHK511DVVVDLVCYR521RNGHNEMDEP531MFTQPLMYKQ541IRKQKPVLQK
551-600551YAELLVSQGV561VNQPEYEEEI571SKYDKICEEA581FTRSKDEKIL591HIKHWLDSPW
601-650601PGFFTLDGQP611RSMTCPSTGL621EEDVLFHIGK631VASSVPVENF641TIHGGLSRIL
651-700651KTRRELVTNR661TVDWALAEYM671AFGSLLKEGI681HVRLSGQDVE691RGTFSHRHHV
701-750701LHDQNVDKRT711CIPMNHLWPN721QAPYTVCNSS731LSEYGVLGFE741LGFAMASPNA
751-800751LVLWEAQFGD761FNNMAQCIID771QFICPGQAKW781VRQNGIVLLL791PHGMEGMGPE
801-850801HSSARPERFL811QMCNDDPDVL821PDLQEENFDI831NQLYDCNWIV841VNCSTPGNFF
851-900851HVLRRQILLP861FRKPLIVFTP871KSLLRHPEAR881TSFDEMLPGT891HFQRVIPENG
901-950901PAAQDPHKVK911RLLFCTGKVY921YDLTRERKAR931NMEEEVAITR941IEQLSPFPFD
951-1000951LLLKEAQKYP961NAELAWCQEE971HKNQGYYDYV981KPRLRTTIDR991AKPVWYAGRD
1001-10341001PAAAPATGNK1011KTHLTELQRF1021LDTAFDLDAF1031KKFS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 39 | - | - | - |
Deep-Palm: 0.84
|
|
| 63 | - | - | - |
Deep-Palm: 0.09
|
|
| 154 | - | - | - |
Deep-Palm: 0.78
|
|
| 226 | - | - | - |
Deep-Palm: 0.71
|
|
| 242 | - | - | - |
Deep-Palm: 0.05
|
|
| 294 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.96
|
|
| 342 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 406 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 498 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.11
|
|
| 518 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.26
|
|
| 577 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.59
|
|
| 615 | - |
Forebrain
(28680068)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 711 | - | - | - |
Deep-Palm: 0.04
|
|
| 727 | - | - | - |
Deep-Palm: 0.58
|
|
| 767 | - | - | - |
Deep-Palm: 0.10
|
|
| 774 | - | - | - |
Deep-Palm: 0.12
|
|
| 813 | - | - | - |
Deep-Palm: 0.74
|
|
| 836 | - | - | - |
Deep-Palm: 0.03
|
|
| 843 | - | - | - |
Deep-Palm: 0.08
|
|
| 915 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 967 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
16
Brain tissue (Mass)
Specificity: 1.000
16/56 (28.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.