Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60648 | Gm2a | Ganglioside GM2 activator (Cerebroside sulfate … | Mus musculus (Mouse) | 193 aa |
Protein Details: Q60648 (Gm2a)
Protein Information
| Accession | Q60648 |
|---|---|
| Protein Names | Ganglioside GM2 activator (Cerebroside sulfate activator protein) (GM2-AP) (Sphingolipid activator protein 3) (SAP-3) |
| Gene Symbol | Gm2a |
| Organism | Mus musculus (Mouse) |
| Length | 193 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 35477839 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MHRLPLLLLL11GLLLAGSVAP21ARLVPKRLSQ31LGGFSWDNCD41EGKDPAVIKS
51-10051LTIQPDPIVV61PGDVVVSLEG71KTSVPLTAPQ81KVELTVEKEV91AGFWVKIPCV
101-150101EQLGSCSYEN111ICDLIDEYIP121PGESCPEPLH131TYGLPCHCPF141KEGTYSLPTS
151-193151NFTVPDLELP161SWLSTGNYRI171QSILSSGGKR181LGCIKIAASL191KGR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 39 | GM2-AP, lipid-recognition domain superfamily | - | - |
Deep-Palm: 0.96
|
|
| 99 | - | - | - |
Deep-Palm: 0.60
|
|
| 106 | - | - | - |
Deep-Palm: 0.07
|
|
| 112 | - | - | - |
Deep-Palm: 0.12
|
|
| 125 | - | - | - |
Deep-Palm: 0.05
|
|
| 136 | - | - | - |
Deep-Palm: 0.50
|
|
| 138 | - | - | - |
Deep-Palm: 0.25
|
|
| 183 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.52
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
NSC
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.