Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60749 | Khdrbs1 | KH domain-containing, RNA-binding, signal transduction-associated … | Mus musculus (Mouse) | 443 aa |
Protein Details: Q60749 (Khdrbs1)
Protein Information
| Accession | Q60749 |
|---|---|
| Protein Names | KH domain-containing, RNA-binding, signal transduction-associated protein 1 (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p21 Ras GTPase-activating protein-associated p62) (p68) |
| Gene Symbol | Khdrbs1 |
| Organism | Mus musculus (Mouse) |
| Length | 443 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQRRDDPASR11LTRSSGRSCS21KDPSGAHPSV31RLTPSRPSPL41PHRPRGGGGG
51-10051PRGGARASPA61TQPPPLLPPS71TPGPDATVVG81SAPTPLLPPS91ATAAVKMEPE
101-150101NKYLPELMAE111KDSLDPSFTH121AMQLLSVEIE131KIQKGESKKD141DEENYLDLFS
151-200151HKNMKLKERV161LIPVKQYPKF171NFVGKILGPQ181GNTIKRLQEE191TGAKISVLGK
201-250201GSMRDKAKEE211ELRKGGDPKY221AHLNMDLHVF231IEVFGPPCEA241YALMAHAMEE
251-300251VKKFLVPDMM261DDICQEQFLE271LSYLNGVPEP281SRGRGVSVRG291RGAAPPPPPV
301-350301PRGRGVGPPR311GALVRGTPVR321GSITRGATVT331RGVPPPPTVR341GAPTPRARTA
351-400351GIQRIPLPPT361PAPETYEDYG371YDDTYAEQSY381EGYEGYYSQS391QGESEYYDYG
401-443401HGELQDSYEA411YGQDDWNGTR421PSLKAPPARP431VKGAYREHPY441GRY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 19 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.91
|
| 238 | - | - | - |
Deep-Palm: 0.41
|
|
| 264 | - | - | - |
Deep-Palm: 0.56
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
Liver
Specificity: 0.571
4/4 (100.0%)
2
Testis
Specificity: 0.286
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.