Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60759 | Gcdh | Glutaryl-CoA dehydrogenase, mitochondrial (GCD) (EC … | Mus musculus (Mouse) | 438 aa |
Protein Details: Q60759 (Gcdh)
Protein Information
| Accession | Q60759 |
|---|---|
| Protein Names | Glutaryl-CoA dehydrogenase, mitochondrial (GCD) (EC 1.3.8.6) |
| Gene Symbol | Gcdh |
| Organism | Mus musculus (Mouse) |
| Length | 438 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSLRGVSARL11LSRRSGLRFP21RFPRTWSSAA31AHTEKTQIRP41AKSSRPVFDW
51-10051KDPLILEEQL61TADEKLIRDT71FRNYCQERLM81SRILLANRNE91VFHRDIVYEM
101-150101GELGVLGPTI111KGYGCAGVSS121VAYGLLTREL131ERVDSGYRSM141MSVQSSLVMH
151-200151PIYTYGSEEQ161RQKYLPGLAK171GELLGCFGLT181EPNHGSDPGG191METRARHNPS
201-250201NQSYTLSGTK211TWITNSPVAD221LFIVWARCED231NCIRGFILEK241GMRGLSAPRI
251-300251EGKFSLRASA261TGMIIMDSVE271VPEENVLPNV281SSLAGPFGCL291NTARYGITWG
301-350301VLGAAEFCLH311TARQYALDRI321QFGVPLARNQ331LVQKKLADML341TEITLGLHAC
351-400351LQLGRLKDQD361KATPEMVSML371KRNNCGKALD381IARQARDILG391GNGISDEYHV
401-438401IRHAMNLEAV411NTYEGTHDIH421ALILGRAITG431IQAFTVGK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 75 | - | - | - |
Deep-Palm: 0.79
|
|
| 115 | SWISSPALM DBPTM CYSMODDB | Acyl-CoA dehydrogenase N-terminal domain |
Liver
(28526873)
|
Liver
(34884899)
|
Deep-Palm: 0.98
|
| 176 | SWISSPALM DBPTM CYSMODDB | Acyl-CoA dehydrogenase N-terminal domain |
Liver
(28526873)
|
Liver
(34884899)
|
Deep-Palm: 0.98
|
| 228 | - | - | - |
Deep-Palm: 0.63
|
|
| 232 | - | - | - |
Deep-Palm: 0.90
|
|
| 289 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
| 308 | - | - | - |
Deep-Palm: 0.97
|
|
| 350 | - | - | - |
Deep-Palm: 0.96
|
|
| 375 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 0.667
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.333
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.