Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60872 | Eif1a | Eukaryotic translation initiation factor 1A … | Mus musculus (Mouse) | 144 aa |
Protein Details: Q60872 (Eif1a)
Protein Information
| Accession | Q60872 |
|---|---|
| Protein Names | Eukaryotic translation initiation factor 1A (eIF-1A) (Eukaryotic translation initiation factor 4C) (eIF-4C) |
| Gene Symbol | Eif1a |
| Organism | Mus musculus (Mouse) |
| Length | 144 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPKNKGKGGK11NRRRGKNENE21SEKRELVFKE31DGQEYAQVIK41MLGNGRLEAM
51-10051CFDGVRRLCH61IRGKLRKKVW71INTSDIILIG81LRDYQDNKAD91VILKYNADEA
101-144101RSLKAYGELP111EHAKINETDT121FGPGDDDEIQ131FDDIGDDDED141IDDI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 51 | SWISSPALM DBPTM CYSMODDB | RNA-binding domain, S1, IF1 type Translation initiation factor 1A / IF-1 Nucleic acid-binding, OB-fold Translation initiation factor 1A (eIF-1A) |
Liver
(28526873)
| - |
GPS-Palm: 0.87
Deep-Palm: 0.95
|
| 59 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.857
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.