Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q60931 | Vdac3 | Non-selective voltage-gated ion channel VDAC3 … | Mus musculus (Mouse) | 283 aa |
Protein Details: Q60931 (Vdac3)
Protein Information
| Accession | Q60931 |
|---|---|
| Protein Names | Non-selective voltage-gated ion channel VDAC3 (VDAC-3) (mVDAC3) (Outer mitochondrial membrane protein porin 3) |
| Gene Symbol | Vdac3 |
| Organism | Mus musculus (Mouse) |
| Length | 283 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MCNTPTYCDL11GKAAKDVFNK21GYGFGMVKID31LKTKSCSGVE41FSTSGHAYTD
51-10051TGKASGNLET61KYKVCNYGLT71FTQKWNTDNT81LGTEISWENK91LAEGLKLTLD
101-150101TIFVPNTGKK111SGKLKASYRR121DCFSLGSNVD131IDFSGPTIYG141WAVLAFEGWL
151-200151AGYQMSFDTA161KSKLSQNNFA171LGYKAADFQL181HTHVNDGTEF191GGSIYQKVNE
201-250201RIETSINLAW211TAGSNNTRFG221IAAKYKLDCR231TSLSAKVNNA241SLIGLGYTQT
251-283251LRPGVKLTLS261ALIDGKNFNA271GGHKVGLGFE281LEA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 2 | Porin domain superfamily |
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.02
|
|
| 8 | Eukaryotic porin/Tom40 Eukaryotic porin Porin domain superfamily |
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.01
|
|
| 36 | Eukaryotic porin/Tom40 Porin domain superfamily | - | - |
Deep-Palm: 0.61
|
|
| 65 | SWISSPALM DBPTM CYSMODDB | Eukaryotic porin |
Brain
(31311849)
brain
(39008777)
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.93
Deep-Palm: 0.86
|
| 122 | - | - | - |
Deep-Palm: 0.96
|
|
| 229 | Eukaryotic porin |
Brain
(34200797)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.158
6/6 (100.0%)
5
Brain
Specificity: 0.132
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.963
26
Brain tissue (Mass)
Specificity: 0.684
26/56 (46.4%)
1
Liver tissue (Mass)
Specificity: 0.026
1/8 (12.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.