Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61009 | Scarb1 | Scavenger receptor class B member … | Mus musculus (Mouse) | 509 aa |
Protein Details: Q61009 (Scarb1)
Protein Information
| Accession | Q61009 |
|---|---|
| Protein Names | Scavenger receptor class B member 1 (SRB1) (SR-BI) |
| Gene Symbol | Scarb1 |
| Organism | Mus musculus (Mouse) |
| Length | 509 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31772009 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGGSSRARWV11ALGLGALGLL21FAALGVVMIL31MVPSLIKQQV41LKNVRIDPSS
51-10051LSFGMWKEIP61VPFYLSVYFF71EVVNPNEVLN81GQKPVVRERG91PYVYREFRQK
101-150101VNITFNDNDT111VSFVENRSLH121FQPDKSHGSE131SDYIVLPNIL141VLGGSILMES
151-200151KPVSLKLMMT161LALVTMGQRA171FMNRTVGEIL181WGYDDPFVHF191LNTYLPDMLP
201-250201IKGKFGLFVG211MNNSNSGVFT221VFTGVQNFSR231IHLVDKWNGL241SKIDYWHSEQ
251-300251CNMINGTSGQ261MWAPFMTPES271SLEFFSPEAC281RSMKLTYNES291RVFEGIPTYR
301-350301FTAPDTLFAN311GSVYPPNEGF321CPCRESGIQN331VSTCRFGAPL341FLSHPHFYNA
351-400351DPVLSEAVLG361LNPNPKEHSL371FLDIHPVTGI381PMNCSVKMQL391SLYIKSVKGI
401-450401GQTGKIEPVV411LPLLWFEQSG421AMGGKPLSTF431YTQLVLMPQV441LHYAQYVLLG
451-500451LGGLLLLVPI461ICQLRSQEKC471FLFWSGSKKG481SQDKEAIQAY491SESLMSPAAK
501-509501GTVLQEAKL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 251 | - | - | - |
Deep-Palm: 0.02
|
|
| 280 | - | - | - |
Deep-Palm: 0.56
|
|
| 321 | - | - | - |
Deep-Palm: 0.19
|
|
| 323 | - | - | - |
Deep-Palm: 0.23
|
|
| 334 | - | - | - |
Deep-Palm: 0.19
|
|
| 384 | - | - | - |
Deep-Palm: 0.91
|
|
| 462 | DBPTM | - | - | - |
Deep-Palm: 0.99
|
| 470 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.667
6/6 (100.0%)
2
Testis
Specificity: 0.222
2/2 (100.0%)
1
NSC
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.