Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61205 | Pafah1b3 | Platelet-activating factor acetylhydrolase IB subunit … | Mus musculus (Mouse) | 232 aa |
Protein Details: Q61205 (Pafah1b3)
Protein Information
| Accession | Q61205 |
|---|---|
| Protein Names | Platelet-activating factor acetylhydrolase IB subunit alpha1 (EC 3.1.1.47) (PAF acetylhydrolase 29 kDa subunit) (PAF-AH 29 kDa subunit) (PAF-AH subunit gamma) (PAFAH subunit gamma) |
| Gene Symbol | Pafah1b3 |
| Organism | Mus musculus (Mouse) |
| Length | 232 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSGEGENPAS11KPTPVQDVQG21DGRWMSLHHR31FVADSKDKEP41EVVFIGDSLV
51-10051QLMHQCEIWR61ELFSPLHALN71FGIGGDSTQH81VLWRLENGEL91EHIRPKIVVV
101-150101WVGTNNHSHT111AEQVTGGIKA121IVQLVNKLQP131QARVVVLGLL141PRGQHPNPLR
151-200151EKNRQVNELV161RAALAGYPRA171HFLDADPGFV181HSDGTISHHD191MYDYLHLSRL
201-232201GYTPVCRALH211SLLLRLLAQD221QGQGIPLPET231AS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 56 | DBPTM SWISSPALM | - | - | - |
Deep-Palm: 0.58
|
| 206 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.