Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61233 | Lcp1 | Plastin-2 (65 kDa macrophage protein) … | Mus musculus (Mouse) | 627 aa |
Protein Details: Q61233 (Lcp1)
Protein Information
| Accession | Q61233 |
|---|---|
| Protein Names | Plastin-2 (65 kDa macrophage protein) (L-plastin) (Lymphocyte cytosolic protein 1) (LCP-1) (pp65) |
| Gene Symbol | Lcp1 |
| Organism | Mus musculus (Mouse) |
| Length | 627 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 35358180 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARGSVSDEE11MMELREAFAK21VDTDGNGYIS31CNELNDLFKA41ACLPLPGYRV
51-10051REITENLMAT61GDLDQDGKIS71FDEFIKVFHG81LKSTEVAKTF91RKAINKKEGI
101-150101CAIGGTSEQS111SVGTQHSYSE121EEKYAFVNWI131NKALENDPDC141RHVIPMNPNT
151-200151DDLFNAVGDG161IVLCKMINLS171VPDTIDERTI181NKKKLTPFTI191QENLNLALNS
201-250201ASAIGCHVVN211IGAEDLKEGK221PYLVLGLLWQ231VIKIGLFADI241ELSRNEALIA
251-300251LLREGESLED261LMKLSPEELL271LRWANYHLEN281AGCTKITNFS291TDIKDSKAYY
301-350301HLLEQVAPKG311DEEGIPAVVI321DMSGLREKDD331IQRAECMLQQ341AERLGCRQFV
351-400351TATDVVRGNP361KLNLAFIANL371FNKYPALHKP381ENQDIDWGAL391EGETREERTF
401-450401RNWMNSLGVN411PRVNHLYSDL421SDALVIFQLY431EKIKVPVDWN441RVNKPPYPKL
451-500451GGNMKKLENC461NYAVDLGKNQ471AKFSLVGIAG481QDLNEGNRTL491TLALVWQLMR
501-550501RYTLNILEDI511GGGQKVNDDI521IVNWVNTTLK531EAQKSSSIAS541FKDPKISTSL
551-600551PVLDLIDAIQ561PGSINYDLLK571TENLDDEEKL581NNAKYAISMA591RKIGARVYAL
601-627601PEDLVEVNPK611MVMTVFACLM621GKGMKRV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 31 | EF-hand domain pair EF-hand domain | - | - |
Deep-Palm: 0.83
|
|
| 42 | EF-hand domain pair EF-hand domain | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.91
|
|
| 101 | - | - | - |
Deep-Palm: 0.87
|
|
| 140 | - | - | - |
Deep-Palm: 0.08
|
|
| 164 | - | - | - |
Deep-Palm: 0.69
|
|
| 206 | - | - | - |
Deep-Palm: 0.96
|
|
| 283 | - | - | - |
Deep-Palm: 0.76
|
|
| 336 | - | - | - |
Deep-Palm: 0.90
|
|
| 346 | - | - | - |
Deep-Palm: 0.95
|
|
| 460 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.92
|
| 618 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.600
3/3 (100.0%)
1
Raw 264.7
Specificity: 0.200
1/1 (100.0%)
1
Brain
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.