Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61361 | Bcan | Brevican core protein | Mus musculus (Mouse) | 883 aa |
Protein Details: Q61361 (Bcan)
Protein Information
| Accession | Q61361 |
|---|---|
| Protein Names | Brevican core protein |
| Gene Symbol | Bcan |
| Organism | Mus musculus (Mouse) |
| Length | 883 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MIPLLLSLLA11ALVLTQAPAA21LADDLKEDSS31EDRAFRVRIG41ATQLRGVLGG
51-10051ALAIPCHVHH61LRPPHSRRAA71PGFPRVKWTF81LSGDREVEVL91VARGLRVKVN
101-150101EAYRFRVALP111AYPASLTDVS121LVLSELRPND131SGVYRCEVQH141GIDDSSDAVE
151-200151VKVKGVVFLY161REGSARYAFS171FAGAQEACAR181IGARIATPEQ191LYAAYLGGYE
201-250201QCDAGWLSDQ211TVRYPIQNPR221EACSGDMDGY231PGVRNYGVVG241PDDLYDVYCY
251-300251AEDLNGELFL261GAPPSKLTWE271EARDYCLERG281AQIASTGQLY291AAWNGGLDRC
301-350301SPGWLADGSV311RYPIITPSQR321CGGGLPGVKT331LFLFPNQTGF341PSKQNRFNVY
351-400351CFRDSAHPSA361SSEASSPASD371GLEAIVTVTE381KLEELQLPQE391AMESESRGAI
401-450401YSIPISEDGG411GGSSTPEDPA421EAPRTPLESE431TQSIAPPTES441SEEEGVALEE
451-500451EERFKDLEAL461EEEKEQEDLW471VWPRELSSPL481PTGSETEHSL491SQVSPPAQAV
501-550501LQLGASPSPG511PPRVRGPPAE521TLLPPREGSP531TSTPGGAREV541GGETGSPELS
551-600551GVPRESEEAG561SSSLEDGPSL571LPATWAPVGP581RELETPSEEK591SGRTVLAGTS
601-650601VQAQPVLPTD611SASHGGVAVA621PSSGDCIPSP631CHNGGTCLEE641KEGFRCLCLP
651-700651GYGGDLCDVG661LHFCSPGWEA671FQGACYKHFS681TRRSWEEAES691QCRALGAHLT
701-750701SICTPEEQDF711VNDRYREYQW721IGLNDRTIEG731DFLWSDGAPL741LYENWNPGQP
751-800751DSYFLSGENC761VVMVWHDQGQ771WSDVPCNYHL781SYTCKMGLVS791CGPPPQLPLA
801-850801QIFGRPRLRY811AVDTVLRYRC821RDGLAQRNLP831LIRCQENGLW841EAPQISCVPR
851-883851RPGRALRSMD861APEGPRGQLS871RHRKAPLTPP881SSL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 56 | - |
Brain
(31311849)
|
Brain
(31311849)
|
Deep-Palm: 0.96
|
|
| 136 | Immunoglobulin V-set domain |
Brain
(31311849)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.76
|
|
| 178 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.85
|
|
| 202 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.37
|
|
| 223 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.23
|
|
| 249 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.61
|
|
| 276 | - | - | - |
Deep-Palm: 0.82
|
|
| 300 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.85
|
|
| 321 | - |
brain
(39008777)
| - |
Deep-Palm: 0.95
|
|
| 351 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.51
|
|
| 626 | - | - | - |
Deep-Palm: 0.31
|
|
| 631 | - | - | - |
Deep-Palm: 0.20
|
|
| 637 | - | - | - |
Deep-Palm: 0.05
|
|
| 646 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.20
|
|
| 648 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.45
|
|
| 657 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.23
|
|
| 664 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.20
|
|
| 675 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.25
|
|
| 692 | - |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.63
|
|
| 703 | Lectin C-type domain |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.46
|
|
| 760 | - | - | - |
Deep-Palm: 0.05
|
|
| 776 | - | - | - |
Deep-Palm: 0.12
|
|
| 784 | - | - | - |
Deep-Palm: 0.26
|
|
| 791 | - |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.42
|
|
| 820 | - |
brain
(39008777)
| - |
Deep-Palm: 0.94
|
|
| 834 | - |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.57
|
|
| 847 | - |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.73
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Brain
Specificity: 0.147
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
29
Brain tissue (Mass)
Specificity: 0.853
29/56 (51.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.