Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61626 | Grik5 | Glutamate receptor ionotropic, kainate 5 … | Mus musculus (Mouse) | 979 aa |
Protein Details: Q61626 (Grik5)
Protein Information
| Accession | Q61626 |
|---|---|
| Protein Names | Glutamate receptor ionotropic, kainate 5 (GluK5) (Glutamate receptor KA-2) (KA2) (Glutamate receptor gamma-2) (GluR gamma-2) |
| Gene Symbol | Grik5 |
| Organism | Mus musculus (Mouse) |
| Length | 979 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPAELLLLLI11VAFANPSCQV21LSSLRMAAIL31DDQTVCGRGE41RLALALAREQ
51-10051INGIIEVPAK61ARVEVDIFEL71QRDSQYETTD81TMCQILPKGV91VSVLGPSSSP
101-150101ASASTVSHIC111GEKEIPHIKV121GPEETPRLQY131LRFASVSLYP141SNEDVSLAVS
151-200151RILKSFNYPS161ASLICAKAEC171LLRLEELVRG181FLISKETLSV191RMLDDSRDPT
201-250201PLLKEIRDDK211VSTIIIDANA221SISHLVLRKA231SELGMTSAFY241KYILTTMDFP
251-300251ILHLDGIVED261SSNILGFSMF271NTSHPFYPEF281VRSLNMSWRE291NCEASTYPGP
301-350301ALSAALMFDA311VHVVVSAVRE321LNRSQEIGVK331PLACTSANIW341PHGTSLMNYL
351-400351RMVEYDGLTG361RVEFNSKGQR371TNYTLRILEK381SRQGHREIGV391WYSNRTLAMN
401-450401ATTLDINLSQ411TLANKTLVVT421TILENPYVMR431RPNFQALSGN441ERFEGFCVDM
451-500451LRELAELLRF461RYRLRLVEDG471LYGAPEPNGS481WTGMVGELIN491RKADLAVAAF
501-550501TITAEREKVI511DFSKPFMTLG521ISILYRVHMG531RKPGYFSFLD541PFSPAVWLFM
551-600551LLAYLAVSCV561LFLAARLSPY571EWYNPHPCLR581ARPHILENQY591TLGNSLWFPV
601-650601GGFMQQGSEI611MPRALSTRCV621SGVWWAFTLI631IISSYTANLA641AFLTVQRMEV
651-700651PVESADDLAD661QTNIEYGTIH671AGSTMTFFQN681SRYQTYQRMW691NYMQSKQPSV
701-750701FVKSTEEGIA711RVLNSRYAFL721LESTMNEYHR731RLNCNLTQIG741GLLDTKGYGI
751-800751GMPLGSPFRD761EITLAILQLQ771ENNRLEILKR781KWWEGGRCPK791EEDHRAKGLG
801-850801MENIGGIFVV811LICGLIIAVF821VAVMEFIWST831RRSAESEEVS841VCQEMLQELR
851-900851HAVSCRKTSR861SRRRRRPGGP871SRALLSLRAV881REMRLSNGKL891YSAGAGGDAG
901-950901AHGGPQRLLD911DPGPPGGPRP921QAPTPCTHVR931VCQECRRIQA941LRASGAGAPP
951-979951RGLGTPAEAT961SPPRPRPGPT971GPRELTEHE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 18 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
|
| 36 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 83 | - | - | - |
Deep-Palm: 0.59
|
|
| 110 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.85
|
|
| 165 | - | - | - |
Deep-Palm: 0.98
|
|
| 170 | - | - | - |
Deep-Palm: 0.98
|
|
| 292 | - | - | - |
Deep-Palm: 0.86
|
|
| 334 | - | - | - |
Deep-Palm: 0.67
|
|
| 447 | - | - | - |
Deep-Palm: 0.95
|
|
| 559 | - | - | - |
Deep-Palm: 0.67
|
|
| 578 | - | - | - |
Deep-Palm: 0.79
|
|
| 619 | - | - | - |
Deep-Palm: 0.76
|
|
| 734 | - | - | - |
Deep-Palm: 0.88
|
|
| 788 | - | - | - |
Deep-Palm: 0.92
|
|
| 813 | - | - | - |
Deep-Palm: 0.82
|
|
| 842 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.88
|
| 855 | - | - | - |
Deep-Palm: 0.94
|
|
| 926 | - | - | - |
Deep-Palm: 0.52
|
|
| 932 | - | - | - |
Deep-Palm: 0.85
|
|
| 935 | - | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 1.000
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.