Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61627 | Grid1 | Glutamate receptor ionotropic, delta-1 (GluD1) … | Mus musculus (Mouse) | 1009 aa |
Protein Details: Q61627 (Grid1)
Protein Information
| Accession | Q61627 |
|---|---|
| Protein Names | Glutamate receptor ionotropic, delta-1 (GluD1) (GluR delta-1 subunit) |
| Gene Symbol | Grid1 |
| Organism | Mus musculus (Mouse) |
| Length | 1009 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEALTLWLLP11WICQCVTVRA21DSIIHIGAIF31EENAAKDDRV41FQLAVSDLSL
51-10051NDDILQSEKI61TYSIKVIEAN71NPFQAVQEAC81DLMTQGILAL91VTSTGCASAN
101-150101ALQSLTDAMH111IPHLFVQRNP121GGSPRTACHL131NPSPDGEAYT141LASRPPVRLN
151-200151DVMLRLVTEL161RWQKFVMFYD171SEYDIRGLQS181FLDQASRLGL191DVSLQKVDKN
201-250201ISHVFTSLFT211TMKTEELNRY221RDTLRRAILL231LSPQGAHSFI241NEAVETNLAS
251-300251KDSHWVFVNE261EISDPEILDL271VHSALGRMTV281VRQIFPSAKD291NQKCMRNNHR
301-350301ISSLLCDPQE311GYLQMLQISN321LYLYDSVLML331ANAFHRKLED341RKWHSMASLN
351-400351CIRKSTKPWN361GGRSMLDTIK371KGHITGLTGV381MEFREDSSNP391YVQFEILGTT
401-450401YSETFGKDMR411KLATWDSEKG421LNGSLQERPM431GSRLQGLTLK441VVTVLEEPFV
451-500451MVAENILGQP461KRYKGFSIDV471LDALAKALGF481KYEIYQAPDG491RYGHQLHNTS
501-550501WNGMIGELIS511KRADLAISAI521TITPERESVV531DFSKRYMDYS541VGILIKKPEE
551-600551KISIFSLFAP561FDFAVWACIA571AAIPVVGVLI581FVLNRIQAVR591SQSATQPRPS
601-650601ASATLHSAIW611IVYGAFVQQG621GESSVNSVAM631RIVMGSWWLF641TLIVCSSYTA
651-700651NLAAFLTVSR661MDNPIRTFQD671LSKQLEMSYG681TVRDSAVYEY691FRAKGTNPLE
701-750701QDSTFAELWR711TISKNGGADN721CVSNPSEGIR731KAKKGNYAFL741WDVAVVEYAA
751-800751LTDDDCSVTV761IGNSISSKGY771GIALQHGSPY781RDLFSQRILE791LQDTGDLDVL
801-850801KQKWWPHTGR811CDLTSHSSTQ821TEGKSLKLHS831FAGVFCILAI841GLLLACLVAA
851-900851LELWWNSNRC861HQETPKEDKE871VNLEQVHRRI881NSLMDEDIAH891KQISPASIEL
901-950901SALEMGGLAP911SQALEPTREY921QNTQLSVSTF931LPEQSSHGTS941RTLSSGPSSN
951-1000951LPLPLSSSAT961MPSIQCKHRS971PNGGLFRQSP981VKTPIPMSFQ991PVPGGVLPEA
1001-10091001LDTSHGTSI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - | - |
Deep-Palm: 0.13
|
|
| 15 | - | - | - |
Deep-Palm: 0.34
|
|
| 80 | - | - | - |
Deep-Palm: 0.91
|
|
| 96 | - | - | - |
Deep-Palm: 0.95
|
|
| 128 | - | - | - |
Deep-Palm: 0.89
|
|
| 294 | - | - | - |
Deep-Palm: 0.25
|
|
| 306 | - | - | - |
Deep-Palm: 0.30
|
|
| 351 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.73
|
|
| 568 | - | - | - |
Deep-Palm: 0.76
|
|
| 645 | - | - | - |
Deep-Palm: 0.57
|
|
| 721 | - | - | - |
Deep-Palm: 0.84
|
|
| 756 | - | - | - |
Deep-Palm: 0.80
|
|
| 811 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.60
|
|
| 836 | - | - | - |
Deep-Palm: 0.98
|
|
| 846 | - | - | - |
Deep-Palm: 0.92
|
|
| 860 | - | - | - |
Deep-Palm: 0.75
|
|
| 966 | - | - | - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.750
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.