Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61655 | Ddx19a | ATP-dependent RNA helicase DDX19A (EC … | Mus musculus (Mouse) | 478 aa |
Protein Details: Q61655 (Ddx19a)
Protein Information
| Accession | Q61655 |
|---|---|
| Protein Names | ATP-dependent RNA helicase DDX19A (EC 3.6.4.13) (DEAD box RNA helicase DEAD5) (mDEAD5) (DEAD box protein 19A) (Eukaryotic translation initiation factor 4A-related sequence 1) |
| Gene Symbol | Ddx19a |
| Organism | Mus musculus (Mouse) |
| Length | 478 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATDSWALAV11DEQEAAVKSM21SSLQIKEEKV31KADTNGVIKT41STTAEKTEEE
51-10051EKEDRAAQSL61LNKLIRSNLV71DNTNQVEVLQ81RDPSSPLYSV91KSFEELRLKP
101-150101QLLQGVYAMG111FNRPSKIQEN121ALPMMLAEPP131QNLIAQSQSG141TGKTAAFVLA
151-200151MLSRVEPADR161YPQCLCLSPT171YELALQTGKV181IEQMGKFHPE191LKLAYAVRGN
201-250201KLERGQKVSE211QIVIGTPGTV221LDWCSKLKFI231DPKKIKVFVL241DEADVMIATQ
251-300251GHQDQSIRIQ261RMLPRNCQML271LFSATFEDSV281WKFAQKVVPD291PNIIKLKREE
301-350301ETLDTIKQYY311VLCNNREEKF321QALCNLYGAI331TIAQAMIFCH341TRKTASWLAA
351-400351ELSKEGHQVA361LLSGEMMVEQ371RAAVIERFRE381GKEKVLVTTN391VCARGIDVEQ
401-450401VSVVINFDLP411VDKDGNPDNE421TYLHRIGRTG431RFGKRGLAVN441MVDSKHSMNI
451-478451LNRIQEHFNK461KIERLDTDDL471DEIEKIAN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 164 | - | - | - |
Deep-Palm: 0.95
|
|
| 166 | - | - | - |
Deep-Palm: 0.95
|
|
| 224 | - | - | - |
Deep-Palm: 0.93
|
|
| 267 | - | - | - |
Deep-Palm: 0.45
|
|
| 313 | - | - | - |
Deep-Palm: 0.61
|
|
| 324 | - | - | - |
Deep-Palm: 0.49
|
|
| 339 | - | - | - |
Deep-Palm: 0.52
|
|
| 392 | SWISSPALM DBPTM CYSMODDB | Helicase conserved C-terminal domain |
Liver
(28526873)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.