Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q61823 | Pdcd4 | Programmed cell death protein 4 … | Mus musculus (Mouse) | 469 aa |
Protein Details: Q61823 (Pdcd4)
Protein Information
| Accession | Q61823 |
|---|---|
| Protein Names | Programmed cell death protein 4 (Protein MA-3) (Topoisomerase-inhibitor suppressed protein) |
| Gene Symbol | Pdcd4 |
| Organism | Mus musculus (Mouse) |
| Length | 469 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDIENEQTLN11VNPTDPDNLS21DSLFSGDEEN31AGTEEIKNEI41NGNWISASTI
51-10051NEARINAKAK61RRLRKNSSRD71SGRGDSVSDN81GSEAVRSGVA91VPTSPKGRLL
101-150101DRRSRSGKGR111GLPKKGGAGG121KGVWGTPGQV131YDVEEVDVKD141PNYDDDQENC
151-200151VYETVVLPLD161ETAFEKTLTP171IIQEYFEHGD181TNEVAEMLRD191LNLGEMKSGV
201-250201PVLAVSLALE211GKASHREMTS221KLLSDLCGTV231MSTNDVEKSF241DKLLKDLPEL
251-300251ALDTPRAPQL261VGQFIARAVG271DGILCNTYID281SYKGTVDCVQ291ARAALDKATV
301-350301LLSMSKGGKR311KDSVWGSGGG321QQPVNHLVKE331IDMLLKEYLL341SGDISEAEHC
351-400351LKELEVPHFH361HELVYEAIVM371VLESTGESAF381KMILDLLKSL391WKSSTITIDQ
401-450401MKRGYERIYN411EIPDINLDVP421HSYSVLERFV431EECFQAGIIS441KQLRDLCPSR
451-469451GRKRFVSEGD461GGRLKPESY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 150 | - | - | - |
Deep-Palm: 0.13
|
|
| 227 | - | - | - |
Deep-Palm: 0.90
|
|
| 275 | - | - | - |
Deep-Palm: 0.76
|
|
| 288 | - | - | - |
Deep-Palm: 0.97
|
|
| 350 | - | - | - |
Deep-Palm: 0.91
|
|
| 433 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.82
|
| 447 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.600
3/3 (100.0%)
2
Testis
Specificity: 0.400
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.