Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q62095 | Ddx3y | ATP-dependent RNA helicase DDX3Y (EC … | Mus musculus (Mouse) | 658 aa |
Protein Details: Q62095 (Ddx3y)
Protein Information
| Accession | Q62095 |
|---|---|
| Protein Names | ATP-dependent RNA helicase DDX3Y (EC 3.6.4.13) (D1Pas1-related sequence 1) (DEAD box protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) |
| Gene Symbol | Ddx3y |
| Organism | Mus musculus (Mouse) |
| Length | 658 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSQVAAESTA11GLDQQFVGLD21LKSSDNQNGG31GNTESKGRYI41PPHLRNRETS
51-10051KGVCDKDSSG61WSCSKDKDAY71SSFGSRDSRG81KPNYFSDRGS91GSRGRFDDHG
101-150101RNDYDGIGGR111DRTGFGKFER121SGHSRWSDRS131DEDDWSKPLP141PSERLEQELF
151-200151SGGNTGINFE161KYDDIPVEAT171GNNCPPHIEN181FSDIEMGEII191MGNIELTRYT
201-250201RPTPVQKHAI211PIIKEKRDLM221ACAQTGSGKT231AAFLLPILSQ241IYTDGPGEAL
251-300251KAMKENGRYG261RRKQYPISLV271LAPTRELAVQ281IYEEARKFSY291RSRVRPCVVY
301-350301GGADTVQQIR311DLERGCHLLV321ATPGRLVDMM331ERGKIGLDFC341KYLVLDEADR
351-400351MLDMGFEPQI361RRIVEQDTMP371PKGVRHTMMF381SATFPKEIQM391LARDFLDEYI
401-450401FLAVGRVGST411SENITQKVVW421VEELDKRSFL431LDLLNATGKD441SLTLVFVETK
451-500451KGADSLENFL461FQERYACTSI471HGDRSQKDRE481EALHQFRSGR491KPILVATAVA
501-550501ARGLDISNVK511HVINFDLPSD521IEEYVHRIGR531TGRVGNLGLA541TSFFNERNLN
551-600551ITKDLLDLLV561EAKQEVPSWL571ESMAYEHHYK581GSSRGRSKSR591FSGGFGARDY
601-650601RQSSGSANAG611FNSNRANSSR621SSGSSHNRGF631GGGGYGGFYN641NDGYGGNYNS
651-658651QAVDWWGN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 54 | - | - | - |
Deep-Palm: 0.48
|
|
| 63 | - | - | - |
Deep-Palm: 0.50
|
|
| 174 | - | - | - |
Deep-Palm: 0.05
|
|
| 222 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.96
|
|
| 297 | SWISSPALM DBPTM CYSMODDB | DEAD/DEAH box helicase |
Liver
(28526873)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.85
|
| 316 | - | - | - |
Deep-Palm: 0.95
|
|
| 340 | - | - | - |
Deep-Palm: 0.96
|
|
| 467 | - | - | - |
Deep-Palm: 0.74
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Liver
Specificity: 0.625
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.375
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.