Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q62192 | Cd180 | CD180 antigen (Lymphocyte antigen 78) … | Mus musculus (Mouse) | 661 aa |
Protein Details: Q62192 (Cd180)
Protein Information
| Accession | Q62192 |
|---|---|
| Protein Names | CD180 antigen (Lymphocyte antigen 78) (Ly-78) (Radioprotective 105 kDa protein) (CD antigen CD180) |
| Gene Symbol | Cd180 |
| Organism | Mus musculus (Mouse) |
| Length | 661 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAPDISCFFL11VALFLASCRA21TTSSDQKCIE31KEVNKTYNCE41NLGLNEIPGT
51-10051LPNSTECLEF61SFNVLPTIQN71TTFSRLINLT81FLDLTRCQIY91WIHEDTFQSQ
101-150101HRLDTLVLTA111NPLIFMAETA121LSGPKALKHL131FFIQTGISSI141DFIPLHNQKT
151-200151LESLYLGSNH161ISSIKLPKGF171PTEKLKVLDF181QNNAIHYLSK191EDMSSLQQAT
201-250201NLSLNLNGND211IAGIELGAFD221SAVFQSLNFG231GTQNLLVIFK241GLKNSTIQSL
251-300251WLGTFEDMDD261EDISPAVFEG271LCEMSVESIN281LQKHYFFNIS291SNTFHCFSGL
301-350301QELDLTATHL311SELPSGLVGL321STLKKLVLSA331NKFENLCQIS341ASNFPSLTHL
351-400351SIKGNTKRLE361LGTGCLENLE371NLRELDLSHD381DIETSDCCNL391QLRNLSHLQS
401-450401LNLSYNEPLS411LKTEAFKECP421QLELLDLAFT431RLKVKDAQSP441FQNLHLLKVL
451-500451NLSHSLLDIS461SEQLFDGLPA471LQHLNLQGNH481FPKGNIQKTN491SLQTLGRLEI
501-550501LVLSFCDLSS511IDQHAFTSLK521MMNHVDLSHN531RLTSSSIEAL541SHLKGIYLNL
551-600551ASNRISIILP561SLLPILSQQR571TINLRQNPLD581CTCSNIYFLE591WYKENMQKLE
601-650601DTEDTLCENP611PLLRGVRLSD621VTLSCSMAAV631GIFFLIVFLL641VFAILLIFAV
651-661651KYFLRWKYQH661I
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
Deep-Palm: 0.04
|
|
| 18 | - | - | - |
Deep-Palm: 0.86
|
|
| 28 | - | - | - |
Deep-Palm: 0.26
|
|
| 39 | - | - | - |
Deep-Palm: 0.21
|
|
| 57 | - | - | - |
Deep-Palm: 0.48
|
|
| 87 | - | - | - |
Deep-Palm: 0.17
|
|
| 272 | - | - | - |
Deep-Palm: 0.11
|
|
| 296 | - | - | - |
Deep-Palm: 0.47
|
|
| 337 | - | - | - |
Deep-Palm: 0.96
|
|
| 365 | - | - | - |
Deep-Palm: 0.96
|
|
| 387 | - | - | - |
Deep-Palm: 0.47
|
|
| 388 | - | - | - |
Deep-Palm: 0.44
|
|
| 419 | - | - | - |
Deep-Palm: 0.95
|
|
| 506 | - | - | - |
Deep-Palm: 0.94
|
|
| 581 | - | - | - |
Deep-Palm: 0.07
|
|
| 583 | - | - | - |
Deep-Palm: 0.05
|
|
| 607 | - | - | - |
Deep-Palm: 0.96
|
|
| 625 | - | - | - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Raw 264.7
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.