Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q62226 | Shh; Hhg1 | Sonic hedgehog protein (SHH) (EC … | Mus musculus (Mouse) | 437 aa |
Protein Details: Q62226 (Shh)
Protein Information
| Accession | Q62226 |
|---|---|
| Protein Names | Sonic hedgehog protein (SHH) (EC 3.1.-.-) (HHG-1) (Shh unprocessed N-terminal signaling and C-terminal autoprocessing domains) (ShhNC) [Cleaved into: Sonic hedgehog protein N-product (ShhN) (Shh N-terminal processed signaling domains) (ShhNp) (Sonic hedgehog protein 19 kDa product)] |
| Gene Symbol | Shh; Hhg1 |
| Organism | Mus musculus (Mouse) |
| Length | 437 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31311849 |
| Database Sources | dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
3
Brain tissue
Specificity: 1.000
3/12 (25.0%)
0
Liver tissue
Specificity: 0.000
0/19 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MLLLLARCFL11VILASSLLVC21PGLACGPGRG31FGKRRHPKKL41TPLAYKQFIP
51-10051NVAEKTLGAS61GRYEGKITRN71SERFKELTPN81YNPDIIFKDE91ENTGADRLMT
101-150101QRCKDKLNAL111AISVMNQWPG121VKLRVTEGWD131EDGHHSEESL141HYEGRAVDIT
151-200151TSDRDRSKYG161MLARLAVEAG171FDWVYYESKA181HIHCSVKAEN191SVAAKSGGCF
201-250201PGSATVHLEQ211GGTKLVKDLR221PGDRVLAADD231QGRLLYSDFL241TFLDRDEGAK
251-300251KVFYVIETLE261PRERLLLTAA271HLLFVAPHND281SGPTPGPSAL291FASRVRPGQR
301-350301VYVVAERGGD311RRLLPAAVHS321VTLREEEAGA331YAPLTAHGTI341LINRVLASCY
351-400351AVIEEHSWAH361RAFAPFRLAH371ALLAALAPAR381TDGGGGGSIP391AAQSATEARG
401-437401AEPTAGIHWY411SQLLYHIGTW421LLDSETMHPL431GMAVKSS
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 20 | Prediction (High) | - | - |
| 25 | Experimental DBPTM SWISSPALM Prediction (High) | - | - |
| 184 | Experimental | Hedgehog amino-terminal signalling domain | 31311849 |