Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q62283 | Tspan7 | Tetraspanin-7 (Tspan-7) (Cell surface glycoprotein … | Mus musculus (Mouse) | 249 aa |
Protein Details: Q62283 (Tspan7)
Protein Information
| Accession | Q62283 |
|---|---|
| Protein Names | Tetraspanin-7 (Tspan-7) (Cell surface glycoprotein A15) (PE31) (TALLA homolog) (Transmembrane 4 superfamily member 2) (CD antigen CD231) |
| Gene Symbol | Tspan7 |
| Organism | Mus musculus (Mouse) |
| Length | 249 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASRRMETKP11VITCLKTLLI21IYSFVFWITG31VILLAVGVWG41KLTLGTYISL
51-10051IAENSTNAPY61VLIGTGTTIV71VFGLFGCFAT81CRGSPWMLKL91YAMFLSLVFL
101-150101AELVAGISGF111VFRHEIKDTF121LRTYTDAMQN131YNGNDERSRA141VDHVQRSLSC
151-200151CGVQNYTNWS161SSPYFLDHGI171PPSCCMNETD181CNPLDLHNLT191VAATKVNQKG
201-249201CYDLVTSFME211TNMGIIAGVA221FGIAFSQLIG231MLLACCLSRF241ITANQYEMV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.76
|
| 77 | - | - | - |
Deep-Palm: 0.96
|
|
| 81 | - | - | - |
Deep-Palm: 0.94
|
|
| 150 | - | - | - |
Deep-Palm: 0.78
|
|
| 151 | - | - | - |
Deep-Palm: 0.81
|
|
| 174 | - | - | - |
Deep-Palm: 0.16
|
|
| 175 | - | - | - |
Deep-Palm: 0.27
|
|
| 181 | - | - | - |
Deep-Palm: 0.17
|
|
| 201 | - | - | - |
Deep-Palm: 0.56
|
|
| 235 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.64
|
|
| 236 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.40
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
Brain
Specificity: 0.143
2/2 (100.0%)
2
Liver
Specificity: 0.143
2/2 (100.0%)
1
Testis
Specificity: 0.071
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.643
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.