Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q62465 | Vat1; Vat-1 | Synaptic vesicle membrane protein VAT-1 … | Mus musculus (Mouse) | 406 aa |
Protein Details: Q62465 (Vat1)
Protein Information
| Accession | Q62465 |
|---|---|
| Protein Names | Synaptic vesicle membrane protein VAT-1 homolog (EC 1.-.-.-) |
| Gene Symbol | Vat1; Vat-1 |
| Organism | Mus musculus (Mouse) |
| Length | 406 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31772009 34200797 35358180 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.619
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
13
Liver tissue
Specificity: 0.619
13/19 (68.4%)
5
Brain tissue
Specificity: 0.238
5/12 (41.7%)
3
Neural Stem Cells
Specificity: 0.143
3/3 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSAEREAAEA11ATVAAATEAG21AETGTGAGEG31APSQPPTVEV41ASDPQPPPAP
51-10051EASASASAPP61LRCLVLTGFG71GYDKVKLQSR81PAVPPAPGPG91QLTLRVRACG
101-150101LNFADLMGRQ111GLYDRLPPLP121VTPGMEGAGV131VVAVGEGVGD141RKAGDRVMVL
151-200151NRSGMWQEEV161TVPSAQTFLM171PEAMTFEEAA181ALLVNYITAY191MVLFDFGNLR
201-250201PGHSVLVHMA211AGGVGMAALQ221LCRTVENVTV231FGTASASKHE241VLKENGVTHP
251-300251IDYHTTDYVD261EIKKISPKGV271DIVMDPLGGS281DTAKGYHLLK291PMGKVVTYGM
301-350301ANLLTGPKRN311LMAMARTWWN321QFSVTALQLL331QANRAVCGFH341LGYLDGEVEL
351-400351VNSVVTRLVA361LYNQGHIKPR371IDSVWPFEKV381ADAMKQMQEK391KNIGKVLLVP
401-406401GPEKET