Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q640N2 | Arl13b | ADP-ribosylation factor-like protein 13B (ADP-ribosylation … | Mus musculus (Mouse) | 427 aa |
Protein Details: Q640N2 (Arl13b)
Protein Information
| Accession | Q640N2 |
|---|---|
| Protein Names | ADP-ribosylation factor-like protein 13B (ADP-ribosylation factor-like protein 2-like 1) (ARL2-like protein 1) (Protein hennin) |
| Gene Symbol | Arl13b |
| Organism | Mus musculus (Mouse) |
| Length | 427 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 37925639 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFSLMANCCN11LFKRWREPVR21KVTLVMVGLD31NAGKTATAKG41IQGEHPEDVA
51-10051PTVGFSKIDL61RQGKFQVTIF71DLGGGKRIRG81IWKNYYAESY91GVIFVVDSSD
101-150101EERMEETKET111MSEVLRHPRI121SGKPILVLAN131KQDKEGALGE141ADVIECLSLE
151-200151KLVNEHKCLC161QIEPCSAVLG171YGKKIDKSIK181KGLYWLLHII191AKDFDALSER
201-250201IQKDTTEQRA211LEEQEKRERA221ERVRKLREER231EREQTELDGT241SGLAEIDSGP
251-300251VLANPFQPIA261AVIIENEKKQ271EKEKKKQTVE281KDSDVGLLEH291KVEPEQAAPQ
301-350301SEADCCLQNP311DERVVDSYRE321ALSQQLDSED331EQDQRGSESG341ENSKKKTKKL
351-400351RMKRSHRVEP361VNTDESTPKS371PTPPQPPPPV381GWGTPKVTRL391PKLEPLGETR
401-427401HNDFYGKPLP411PLAVRQRPNG421DAQDTIS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 8 | DBPTM SWISSPALM | Ciliary function-associated GTPase | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.01
|
| 9 | DBPTM SWISSPALM | Ciliary function-associated GTPase | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
| 146 | - | - | - |
Deep-Palm: 0.97
|
|
| 158 | - | - | - |
Deep-Palm: 0.94
|
|
| 160 | - | - | - |
Deep-Palm: 0.94
|
|
| 165 | - | - | - |
Deep-Palm: 0.88
|
|
| 305 | - | - | - |
Deep-Palm: 0.60
|
|
| 306 | - | - | - |
Deep-Palm: 0.73
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
Liver
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.