Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q64264 | Htr1a | 5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) … | Mus musculus (Mouse) | 421 aa |
Protein Details: Q64264 (Htr1a)
Protein Information
| Accession | Q64264 |
|---|---|
| Protein Names | 5-hydroxytryptamine receptor 1A (5-HT-1A) (5-HT1A) (Serotonin receptor 1A) |
| Gene Symbol | Htr1a |
| Organism | Mus musculus (Mouse) |
| Length | 421 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDMFSLGQGN11NTTTSLEPFG21TGGNDTGLSN31VTFSYQVITS41LLLGTLIFCA
51-10051VLGNACVVAA61IALERSLQNV71ANYLIGSLAV81TDLMVSVLVL91PMAALYQVLN
101-150101KWTLGQVTCD111LFIALDVLCC121TSSILHLCAI131ALDRYWAITD141PIDYVNKRTP
151-200151RRAAALISLT161WLIGFLISIP171PMLGWRTPED181RSNPNECTIS191KDHGYTIYST
201-250201FGAFYIPLLL211MLVLYGRIFR221AARFRIRKTV231KKVEKKGAGT241SFGTSSAPPP
251-300251KKSLNGQPGS261GDCRRSAENR271AVGTPCANGA281VRQGEDDATL291EVIEVHRVGN
301-350301SKGHLPLPSE311SGATSYVPAC321LERKNERTAE331AKRKMALARE341RKTVKTLGII
351-400351MGTFILCWLP361FFIVALVLPF371CESSCHMPEL381LGAIINWLGY391SNSLLNPVIY
401-421401AYFNKDFQNA411FKKIIKCKFC421R
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 49 | - | - | - |
Deep-Palm: 0.72
|
|
| 56 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.92
|
|
| 109 | - | - | - |
Deep-Palm: 0.23
|
|
| 119 | - | - | - |
Deep-Palm: 0.46
|
|
| 120 | - | - | - |
Deep-Palm: 0.25
|
|
| 128 | - | - | - |
Deep-Palm: 0.38
|
|
| 187 | - | - | - |
Deep-Palm: 0.24
|
|
| 263 | - | - | - |
Deep-Palm: 0.72
|
|
| 276 | - | - | - |
Deep-Palm: 0.82
|
|
| 320 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 357 | - | - | - |
Deep-Palm: 0.25
|
|
| 371 | - | - | - |
Deep-Palm: 0.51
|
|
| 375 | - | - | - |
Deep-Palm: 0.30
|
|
| 417 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.01
|
| 420 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain tissue (Mass)
Specificity: 1.000
1/56 (1.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.