Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q64343 | Abcg1 | ATP-binding cassette sub-family G member … | Mus musculus (Mouse) | 666 aa |
Protein Details: Q64343 (Abcg1)
Protein Information
| Accession | Q64343 |
|---|---|
| Protein Names | ATP-binding cassette sub-family G member 1 (EC 7.6.2.-) (ATP-binding cassette transporter 8) (White protein homolog) |
| Gene Symbol | Abcg1 |
| Organism | Mus musculus (Mouse) |
| Length | 666 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MACLMAAFSV11GTAMNASSYS21AAMTEPKSVC31VSVDEVVSSN41VDEVETDLLN
51-10051GHLKKVDNNF61TEAQRFSSLP71RRAAVNIEFK81DLSYSVPEGP91WWKKKGYKTL
101-150101LKGISGKFNS111GELVAIMGPS121GAGKSTLMNI131LAGYRETGMK141GAVLINGMPR
151-200151DLRCFRKVSC161YIMQDDMLLP171HLTVQEAMMV181SAHLKLQEKD191EGRREMVKEI
201-250201LTALGLLPCA211NTRTGSLSGG221QRKRLAIALE231LVNNPPVMFF241DEPTSGLDSA
251-300251SCFQVVSLMK261GLAQGGRSIV271CTIHQPSAKL281FELFDQLYVL291SQGQCVYRGK
301-350301VSNLVPYLRD311LGLNCPTYHN321PADFVMEVAS331GEYGDQNSRL341VRAVREGMCD
351-400351ADYKRDLGGD361TDVNPFLWHR371PAEEDSASME381GCHSFSASCL391TQFCILFKRT
401-450401FLSIMRDSVL411THLRITSHIG421IGLLIGLLYL431GIGNEAKKVL441SNSGFLFFSM
451-500451LFLMFAALMP461TVLTFPLEMS471VFLREHLNYW481YSLKAYYLAK491TMADVPFQIM
501-550501FPVAYCSIVY511WMTSQPSDAV521RFVLFAALGT531MTSLVAQSLG541LLIGAASTSL
551-600551QVATFVGPVT561AIPVLLFSGF571FVSFDTIPAY581LQWMSYISYV591RYGFEGVILS
601-650601IYGLDREDLH611CDIAETCHFQ621KSEAILRELD631VENAKLYLDF641IVLGIFFISL
651-666651RLIAYFVLRY661KIRAER
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.03
|
|
| 30 | - | - | - |
Deep-Palm: 0.79
|
|
| 154 | - | - | - |
Deep-Palm: 0.89
|
|
| 160 | - | - | - |
Deep-Palm: 0.25
|
|
| 209 | - | - | - |
Deep-Palm: 0.98
|
|
| 252 | - | - | - |
Deep-Palm: 0.96
|
|
| 271 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 295 | - | - | - |
Deep-Palm: 0.95
|
|
| 315 | - | - | - |
Deep-Palm: 0.95
|
|
| 349 | - | - | - |
Deep-Palm: 0.88
|
|
| 382 | - | - | - |
Deep-Palm: 0.45
|
|
| 389 | - | - | - |
Deep-Palm: 0.74
|
|
| 394 | - | - | - |
Deep-Palm: 0.63
|
|
| 506 | - | - | - |
Deep-Palm: 0.03
|
|
| 611 | - | - | - |
Deep-Palm: 0.64
|
|
| 617 | - | - | - |
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Raw 264.7
Specificity: 0.500
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain tissue (Mass)
Specificity: 0.500
1/56 (1.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.