Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q64374 | Rgn | Regucalcin (RC) (Gluconolactonase) (GNL) (EC … | Mus musculus (Mouse) | 299 aa |
Protein Details: Q64374 (Rgn)
Protein Information
| Accession | Q64374 |
|---|---|
| Protein Names | Regucalcin (RC) (Gluconolactonase) (GNL) (EC 3.1.1.17) (Senescence marker protein 30) (SMP-30) |
| Gene Symbol | Rgn |
| Organism | Mus musculus (Mouse) |
| Length | 299 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSIKVECVL11RENYRCGESP21VWEEASQSLL31FVDIPSKIIC41RWDTVSNQVQ
51-10051RVAVDAPVSS61VALRQLGGYV71ATIGTKFCAL81NWENQSVFVL91AMVDEDKKNN
101-150101RFNDGKVDPA111GRYFAGTMAE121ETAPAVLERH131QGSLYSLFPD141HSVKKYFDQV
151-200151DISNGLDWSL161DHKIFYYIDS171LSYTVDAFDY181DLQTGQISNR191RIVYKMEKDE
201-250201QIPDGMCIDA211EGKLWVACYN221GGRVIRLDPE231TGKRLQTVKL241PVDKTTSCCF
251-299251GGKDYSEMYV261TCARDGLNAE271GLLRQPDAGN281IFKITGLGVK291GIAPYSYAG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 8 | SWISSPALM DBPTM CYSMODDB | Six-bladed beta-propeller, TolB-like |
liver
(26165157)
| - |
Deep-Palm: 0.03
|
| 16 | Six-bladed beta-propeller, TolB-like | - |
Liver
(34884899)
|
Deep-Palm: 0.48
|
|
| 40 | Calcium-dependent phosphotriesterase SMP-30/Gluconolactonase/LRE-like region Six-bladed beta-propeller, TolB-like | - | - |
Deep-Palm: 0.75
|
|
| 78 | - | - | - |
Deep-Palm: 0.83
|
|
| 207 | SWISSPALM DBPTM CYSMODDB | SMP-30/Gluconolactonase/LRE-like region |
Liver
(28526873)
| - |
Deep-Palm: 0.41
|
| 218 | SWISSPALM DBPTM CYSMODDB | SMP-30/Gluconolactonase/LRE-like region |
Liver
(28526873)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.91
|
| 248 | SWISSPALM DBPTM CYSMODDB | SMP-30/Gluconolactonase/LRE-like region |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.93
|
| 249 | SWISSPALM DBPTM CYSMODDB | SMP-30/Gluconolactonase/LRE-like region |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.89
|
| 262 | SWISSPALM DBPTM CYSMODDB | SMP-30/Gluconolactonase/LRE-like region |
Liver
(28526873)
| - |
Deep-Palm: 0.92
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 0.500
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.500
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.