Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q64521 | Gpd2 | Glycerol-3-phosphate dehydrogenase, mitochondrial (GPD-M) (GPDH-M) … | Mus musculus (Mouse) | 727 aa |
Protein Details: Q64521 (Gpd2)
Protein Information
| Accession | Q64521 |
|---|---|
| Protein Names | Glycerol-3-phosphate dehydrogenase, mitochondrial (GPD-M) (GPDH-M) (EC 1.1.5.3) (Protein TISP38) |
| Gene Symbol | Gpd2 |
| Organism | Mus musculus (Mouse) |
| Length | 727 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAFQKAVKGT11ILVGGGALAT21VLGLSPFAHY31RRKQVSLAYV41EAAGYLTEPV
51-10051NREPPSREAQ61LMTLKNTPEF71DILVIGGGAT81GCGCALDAVT91RGLKTALVER
101-150101DDFSSGTSSR111STKLIHGGVR121YLQKAIMNLD131VEQYRMVKEA141LHERANLLEI
151-200151APHLSAPLPI161MLPLYKWWQL171PYYWVGIKMY181DLVAGSQCLK191SSYVLSKSRA
201-250201LEHFPMLQKD211KLVGAIVYYD221GQHNDARMNL231AIALTAARYG241AATANYMEVV
251-300251SLLKKTDPET261GKERVSGARC271KDVLTGQEFD281VRAKCVINAS291GPFTDSVRKM
301-350301DDKNVVPICQ311PSAGVHIVMP321GYYSPENMGL331LDPATSDGRV341IFFLPWEKMT
351-400351IAGTTDTPTD361VTHHPIPSEE371DINFILNEVR381NYLSSDVEVR391RGDVLAAWSG
401-450401IRPLVTDPKS411ADTQSISRNH421VVDISDSGLI431TIAGGKWTTY441RSMAEDTVDA
451-500451AVKFHNLNAG461PSRTVGLFLQ471GGKDWSPTLY481IRLVQDYGLE491SEVAQHLAKT
501-550501YGDKAFEVAK511MASVTGKRWP521VVGVRLVSEF531PYIEAEVKYG541IKEYACTAVD
551-600551MISRRTRLAF561LNVQAAEEAL571PRIVELMGRE581LNWSELRKQE591ELETATRFLY
601-650601YEMGYKSRTE611QLTDSTEISL621LPSDIDRYKK631RFHKFDEDEK641GFITIVDVQR
651-700651VLESINVQMD661ENTLHEILCE671VDLNKNGQVE681LHEFLQLMSA691VQKGRVSGSR
701-727701LAILMKTAEE711NLDRRVPIPV721DRSCGGL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 82 | SWISSPALM DBPTM CYSMODDB | FAD dependent oxidoreductase |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.97
|
| 84 | SWISSPALM DBPTM CYSMODDB | FAD dependent oxidoreductase |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.98
|
| 188 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.91
|
| 270 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.97
|
|
| 285 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.92
|
|
| 309 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.34
|
|
| 546 | SWISSPALM DBPTM CYSMODDB | C-terminal domain of alpha-glycerophosphate oxidase |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.92
|
| 669 | - | - | - |
Deep-Palm: 0.37
|
|
| 724 | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.171
6/6 (100.0%)
4
Brain
Specificity: 0.114
4/4 (100.0%)
1
Testis
Specificity: 0.029
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
24
Brain tissue (Mass)
Specificity: 0.686
24/56 (42.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.