Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q66PJ3 | ARL6IP4 | ADP-ribosylation factor-like protein 6-interacting protein … | Homo sapiens (Human) | 237 aa |
Protein Details: Q66PJ3 (ARL6IP4)
Protein Information
| Accession | Q66PJ3 |
|---|---|
| Protein Names | ADP-ribosylation factor-like protein 6-interacting protein 4 (ARL-6-interacting protein 4) (Aip-4) (HSP-975) (HSVI-binding protein) (SR-15) (SRp25) (SR-25) (Splicing factor SRrp37) |
| Gene Symbol | ARL6IP4 |
| Organism | Homo sapiens (Human) |
| Length | 237 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31382980 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAHVGSRKRS11RSRSRSRGRG21SEKRKKKSRK31DTSRNCSAST41SQGRKASTAP
51-10051GAEASPSPCI61TERSKQKARR71RTRSSSSSSS81SSSSSSSSSS91SSSSSSSSDG
101-150101RKKRGKYKDK111RRKKKKKRKK121LKKKGKEKAE131AQQVEALPGP141SLDQWHRSAG
151-200151EEEDGPVLTD161EQKSRIQAMK171PMTKEEWDAR181QSIIRKVVDP191ETGRTRLIKG
201-237201DGEVLEEIVT211KERHREINKQ221ATRGDCLAFQ231MRAGLLP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 36 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.92
|
|
| 59 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
|
| 226 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.23
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
U937 cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 174 | S → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 220 | C → C | 0.001887 | SNP | Silent | UCEC |