Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q69ZX8 | Ablim3 | Actin-binding LIM protein 3 (abLIM-3) … | Mus musculus (Mouse) | 682 aa |
Protein Details: Q69ZX8 (Ablim3)
Protein Information
| Accession | Q69ZX8 |
|---|---|
| Protein Names | Actin-binding LIM protein 3 (abLIM-3) (Actin-binding LIM protein family member 3) |
| Gene Symbol | Ablim3 |
| Organism | Mus musculus (Mouse) |
| Length | 682 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MNTSIPYQQS11PYSPRGGSNV21IQCYRCGDTC31KGEVVRVHNN41HFHIRCFTCQ
51-10051VCGCGLAQSG61FFFKNQEYIC71TQDYQQLYGT81RCDSCRDFIT91GEVISALGRT
101-150101YHPKCFVCSL111CRKPFPIGDK121VTFSGKECVC131QTCSQSMTSS141KPIKIRGPSH
151-200151CAGCKEEIKH161GQSLLALDKQ171WHVSCFKCQT181CSVILTGEYI191SKDGVPYCES
201-250201DYHSQFGIKC211ETCDRYISGR221VLEAGGKHYH231PTCARCVRCH241QMFTEGEEMY
251-300251LTGSEVWHPI261CKQAARAEKK271LKHRRTSETS281ISPPGSSIGS291PNRVICAKVD
301-350301NEILNYKDLA311ALPKVKSIYE321VQRPDLISYE331PHSRYTSDEM341LERCGYGESL
351-400351GTLSPYSQDI361YENLDLRQRR371ASSPGYIDSP381TYSRQGMSPT391FSRSPHYYRS
401-450401GPESGRSSPY411HSQLDVRSST421PTSYQAPKHF431HIPAGESNIY441RKPPIYKRHG
451-500451DLSTATKSKT461SEDISQASKY471SPAYSPDPYY481ASESEYWTYH491GSPKVPRARR
501-550501FSSGGEEEDF511DRSMHKLQSG521IGRLILKEEM531KARSSSYADP541WTPPRSSTSS
551-600551REALHTTGYE561MSFNGSPRSH571YLADSDPLIS581KSASLPAYRR591NGLHRTPSAD
601-650601LFHYDSMNAV611NWGMREYKIY621PYELLLVTTR631GRNRLPKDVD641RTRLERHLSQ
651-682651EEFYQVFGMT661ISEFERLALW671KRNELKKQAR681LF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 23 | Cysteine Rich Protein Glucocorticoid receptor-like (DNA-binding domain) | - | - |
Deep-Palm: 0.15
|
|
| 26 | Cysteine Rich Protein Glucocorticoid receptor-like (DNA-binding domain) Actin-binding LIM | - | - |
Deep-Palm: 0.07
|
|
| 30 | Zinc finger, LIM-type Cysteine Rich Protein Glucocorticoid receptor-like (DNA-binding domain) Actin-binding LIM | - | - |
Deep-Palm: 0.12
|
|
| 46 | Zinc finger, LIM-type Cysteine Rich Protein Actin-binding LIM | - | - |
Deep-Palm: 0.15
|
|
| 49 | Zinc finger, LIM-type Cysteine Rich Protein Actin-binding LIM | - | - |
Deep-Palm: 0.05
|
|
| 52 | - | - | - |
Deep-Palm: 0.03
|
|
| 54 | - | - | - |
Deep-Palm: 0.04
|
|
| 70 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.03
|
|
| 82 | - | - | - |
Deep-Palm: 0.03
|
|
| 85 | - | - | - |
Deep-Palm: 0.12
|
|
| 105 | - | - | - |
Deep-Palm: 0.92
|
|
| 108 | - | - | - |
Deep-Palm: 0.83
|
|
| 111 | - | - | - |
Deep-Palm: 0.74
|
|
| 128 | - | - | - |
Deep-Palm: 0.14
|
|
| 130 | - | - | - |
Deep-Palm: 0.16
|
|
| 133 | - | - | - |
Deep-Palm: 0.24
|
|
| 151 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.50
|
|
| 154 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.79
|
|
| 175 | - | - | - |
Deep-Palm: 0.48
|
|
| 178 | - | - | - |
Deep-Palm: 0.43
|
|
| 181 | - | - | - |
Deep-Palm: 0.23
|
|
| 198 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.07
|
|
| 210 | - | - | - |
Deep-Palm: 0.08
|
|
| 213 | - | - | - |
Deep-Palm: 0.24
|
|
| 233 | LIM domain |
Brain
(31311849)
|
Brain
(31311849)
|
Deep-Palm: 0.40
|
|
| 236 | - | - | - |
Deep-Palm: 0.07
|
|
| 239 | - | - | - |
Deep-Palm: 0.03
|
|
| 261 | - | - | - |
Deep-Palm: 0.65
|
|
| 296 | - | - | - |
Deep-Palm: 0.83
|
|
| 344 | - | - | - |
Deep-Palm: 0.80
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain
Specificity: 0.600
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver tissue (Mass)
Specificity: 0.400
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.