Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6A0E3 | Eftud2 | 116 kDa U5 small nuclear … | Mus musculus (Mouse) | 976 aa |
Protein Details: Q6A0E3 (Eftud2)
Protein Information
| Accession | Q6A0E3 |
|---|---|
| Protein Names | 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) |
| Gene Symbol | Eftud2 |
| Organism | Mus musculus (Mouse) |
| Length | 976 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501AFGGIMDTDL11YDEFGNYIGP21ELDSDEDDDE31LGRETKDLDE41DEDEDEDDVG
51-10051EHEDDHPGME61VVLHEDKKYY71PTAEEVYGPE81VETIVQEEDT91QPLTEPIIKP
101-150101VKTKKFTLME111QTLPVTVYEM121DFLADLMDNS131ELIRNVTLCG141HLHHGKTCFV
151-200151DCLIEQTHPE161IRKRYDQDLC171YTDILFTEQE181RGVGIKSTPV191TVVLPDTKGK
201-250201SYLFNIMDTP211GHVNFSDEVT221AGLRISDGVV231LFIDAAEGVM241LNTERLIKHA
251-300251VQERLAVTVC261INKIDRLILE271LKLPPTDAYY281KLRHIVDEVN291GLISMYSTDE
301-350301NLILSPLLGN311VCFSSSQYSI321CFTLGSFAKI331YADTFGDINY341QEFAKRLWGD
351-400351IYFNPKTRKF361TKKAPSSSSQ371RSFVEFILEP381LYKILAQVVG391DVDTSLPRTL
401-450401DELGIHLTKE411ELKLNIRPLL421RLVCKKFFGE431FTGFVDMCVQ441HIPSPKVGAK
451-500451PKIEHTYTGG461VDSDLGEAMS471DCDPDGPLMC481HTTKMYSTDD491GVQFHAFGRV
501-550501LSGTIHAGQP511VKVLGENYTL521EDEEDSQICT531VGRLWISVAR541YHIEVNRVPA
551-600551GNWVLIEGVD561QPIVKTATIT571EPRGNEEAQI581FRPLKFNTTS591VIKIAVEPVN
601-650601PSELPKMLDG611LRKVNKSYPS621LTTKVEESGE631HVILGTGELY641LDCVMHDLRK
651-700651MYSEIDIKVA661DPVVTFCETV671VETSSLKCFA681ETPNKKNKIT691MIAEPLEKGL
701-750701AEDIENEVVQ711ITWNRKKLGE721FFQTKYDWDL731LAARSIWAFG741PDATGPNILV
751-800751DDTLPSEVDK761ALLGSVKDSI771VQGFQWGTRE781GPLCDELIRN791VKFKILDAVV
801-850801AQEPLHRGGG811QIIPTARRVV821YSAFLMATPR831LMEPYYFVEV841QAPADCVSAV
851-900851YTVLARRRGH861VTQDAPIPGS871PLYTIKAFIP881AIDSFGFETD891LRTHTQGQAF
901-950901SLSVFHHWQI911VPGDPLDKSI921VIRPLEPQPA931PHLAREFMIK941TRRRKGLSED
951-976951VSISKFFDDP961MLLELAKQDV971VLNYPM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 139 | - | - | - |
Deep-Palm: 0.61
|
|
| 148 | - | - | - |
Deep-Palm: 0.47
|
|
| 152 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.35
|
|
| 170 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.54
|
|
| 260 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
|
| 312 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.92
|
|
| 321 | - | - | - |
Deep-Palm: 0.55
|
|
| 424 | - | - | - |
Deep-Palm: 0.97
|
|
| 438 | - | - | - |
Deep-Palm: 0.56
|
|
| 472 | - | - | - |
Deep-Palm: 0.12
|
|
| 480 | - | - | - |
Deep-Palm: 0.03
|
|
| 529 | - | - | - |
Deep-Palm: 0.89
|
|
| 643 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.94
|
|
| 667 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.76
|
|
| 678 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.71
|
|
| 784 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.91
|
|
| 846 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.