Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6A0E3 | Eftud2; mKIAA0031; Snrp116 | 116 kDa U5 small nuclear … | Mus musculus (Mouse) | 976 aa |
Protein Details: Q6A0E3 (Eftud2)
Protein Information
| Accession | Q6A0E3 |
|---|---|
| Protein Names | 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) |
| Gene Symbol | Eftud2; mKIAA0031; Snrp116 |
| Organism | Mus musculus (Mouse) |
| Length | 976 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
2
Testis
Specificity: 1.000
2/2 (100.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Liver tissue
Specificity: 0.000
0/19 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501AFGGIMDTDL11YDEFGNYIGP21ELDSDEDDDE31LGRETKDLDE41DEDEDEDDVG
51-10051EHEDDHPGME61VVLHEDKKYY71PTAEEVYGPE81VETIVQEEDT91QPLTEPIIKP
101-150101VKTKKFTLME111QTLPVTVYEM121DFLADLMDNS131ELIRNVTLCG141HLHHGKTCFV
151-200151DCLIEQTHPE161IRKRYDQDLC171YTDILFTEQE181RGVGIKSTPV191TVVLPDTKGK
201-250201SYLFNIMDTP211GHVNFSDEVT221AGLRISDGVV231LFIDAAEGVM241LNTERLIKHA
251-300251VQERLAVTVC261INKIDRLILE271LKLPPTDAYY281KLRHIVDEVN291GLISMYSTDE
301-350301NLILSPLLGN311VCFSSSQYSI321CFTLGSFAKI331YADTFGDINY341QEFAKRLWGD
351-400351IYFNPKTRKF361TKKAPSSSSQ371RSFVEFILEP381LYKILAQVVG391DVDTSLPRTL
401-450401DELGIHLTKE411ELKLNIRPLL421RLVCKKFFGE431FTGFVDMCVQ441HIPSPKVGAK
451-500451PKIEHTYTGG461VDSDLGEAMS471DCDPDGPLMC481HTTKMYSTDD491GVQFHAFGRV
501-550501LSGTIHAGQP511VKVLGENYTL521EDEEDSQICT531VGRLWISVAR541YHIEVNRVPA
551-600551GNWVLIEGVD561QPIVKTATIT571EPRGNEEAQI581FRPLKFNTTS591VIKIAVEPVN
601-650601PSELPKMLDG611LRKVNKSYPS621LTTKVEESGE631HVILGTGELY641LDCVMHDLRK
651-700651MYSEIDIKVA661DPVVTFCETV671VETSSLKCFA681ETPNKKNKIT691MIAEPLEKGL
701-750701AEDIENEVVQ711ITWNRKKLGE721FFQTKYDWDL731LAARSIWAFG741PDATGPNILV
751-800751DDTLPSEVDK761ALLGSVKDSI771VQGFQWGTRE781GPLCDELIRN791VKFKILDAVV
801-850801AQEPLHRGGG811QIIPTARRVV821YSAFLMATPR831LMEPYYFVEV841QAPADCVSAV
851-900851YTVLARRRGH861VTQDAPIPGS871PLYTIKAFIP881AIDSFGFETD891LRTHTQGQAF
901-950901SLSVFHHWQI911VPGDPLDKSI921VIRPLEPQPA931PHLAREFMIK941TRRRKGLSED
951-976951VSISKFFDDP961MLLELAKQDV971VLNYPM
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 152 | Prediction (Low) | - | - |
| 170 | Prediction (Low) | - | - |
| 260 | Prediction (High) | - | - |
| 312 | Prediction (Medium) | - | - |
| 643 | Prediction (Low) | - | - |
| 667 | Prediction (Medium) | - | - |
| 678 | Prediction (Medium) | - | - |
| 784 | Prediction (High) | - | - |
| 846 | Prediction (Low) | - | - |