Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6DFW4 | Nop58 | Nucleolar protein 58 (MSSP) (Nucleolar … | Mus musculus (Mouse) | 536 aa |
Protein Details: Q6DFW4 (Nop58)
Protein Information
| Accession | Q6DFW4 |
|---|---|
| Protein Names | Nucleolar protein 58 (MSSP) (Nucleolar protein 5) (SIK-similar protein) |
| Gene Symbol | Nop58 |
| Organism | Mus musculus (Mouse) |
| Length | 536 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 34884899 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLVLFETSVG11YAIFKVLNEK21KLQEVDSLWK31EFETPEKANK41IVKLKHFEKF
51-10051QDTAEALAAF61TALMEGKINK71QLKKVLKKIV81KEAHEPLAVA91DAKLGGVIKE
101-150101KLNLSCIHSP111VVNELMRGIR121SQMDGLIPGV131EPREMAAMCL141GLAHSLSRYR
151-200151LKFSADKVDT161MIVQAISLLD171DLDKELNNYI181MRCREWYGWH191FPELGKIISD
201-250201NLTYCKCLQK211VGDRKNYASA221SLSEFLSEEV231EAEVKAAAEI241SMGTEVSEED
251-300251ICNILHLCTQ261VIEISEYRTQ271LYEYLQNRMM281AIAPNVTVMV291GELVGARLIA
301-350301HAGSLLNLAK311HAASTVQILG321AEKALFRALK331SRRDTPKYGL341IYHASLVGQS
351-400351SPKHKGKISR361MLAAKTVLAI371RYDAFGEDSS381SAMGIENRAK391LEARLRILED
401-450401RGIRKISGTG411KALAKAEKYE421HKSEVKTYDP431SGDSTLPTCS441KKRKIEEVDK
451-500451EDEITEKKAK461KAKIKIKAEV471EEEMEEEEAE481EEQVVEEEPT491VKKKKKKDKK
501-536501KHIKEEPLSE511EEPCTSTAVP521SPEKKKKKKK531KKDAED
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 106 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
| 139 | - | - | - |
Deep-Palm: 0.97
|
|
| 183 | - | - | - |
Deep-Palm: 0.45
|
|
| 205 | snoRNA binding domain, fibrillarin |
MLE
(39008777)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.80
|
|
| 207 | - | - | - |
Deep-Palm: 0.84
|
|
| 252 | - | - | - |
Deep-Palm: 0.36
|
|
| 258 | - | - | - |
Deep-Palm: 0.50
|
|
| 439 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.65
|
|
| 514 | - | - | - |
Deep-Palm: 0.86
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
Liver
Specificity: 0.500
3/3 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.