Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6GQT6 | Scap | Sterol regulatory element-binding protein cleavage-activating … | Mus musculus (Mouse) | 1276 aa |
Protein Details: Q6GQT6 (Scap)
Protein Information
| Accession | Q6GQT6 |
|---|---|
| Protein Names | Sterol regulatory element-binding protein cleavage-activating protein (SCAP) (SREBP cleavage-activating protein) |
| Gene Symbol | Scap |
| Organism | Mus musculus (Mouse) |
| Length | 1276 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34200797 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTLTERLREK11ISQAFYNHGL21LCASYPIPII31LFTGLCILAC41CYPLLKLPLP
51-10051GTGPVEFSTP61VKGYSPPPAD71SDHKQGEPSE81QPEWYVGAPV91AYIQQIFVKS
101-150101SVSPWHRNLL111AVDVFRSPLS121RAFQLVEEIR131NHVLRDSSGT141KSLEEVCLQV
151-200151TDLLPGLRKL161RSLLPEHGCL171LLSPGNFWQN181DWERFHADPD191IIGTIHQHEP
201-250201KTLQTSATLK211DLLFGVPGKY221SGVSLYTRKR231MVSYTITLVF241QRYHAKFLSS
251-300251LRARLMLLHP261SPNCSLRAEN271LVHVHFKEEI281GIAELIPLVT291TYIILFAYIY
301-350301FSTRKIDMVK311SKWGLALAAV321VTVLSSLLMS331VGLCTLFGLT341PTLNGGEIFP
351-400351YLVVVIGLEN361VLVLTKSVVS371TPVDLEVKLR381IAQGLSSESW391SIMKNAATEL
401-450401GIILIGYFTL411VPAIQEFCLF421AVVGLVSDFF431LQMLFFTTVL441SIDIRRMELA
451-500451DLNKRLPPES461CLPSAKPVGR471PARYERQQAV481RPSTPHTITL491QPSSFRNLRL
501-550501PKRLRVIYFL511ARTRLAQRLI521MAGTVVWIGI531LVYTDPAGLR541TYLAAQVTEQ
551-600551SPLGEGSLGP561MPVPSGVLPA571SHPDPAFSIF581PPDAPKLPEN591QTLPGELPEH
601-650601AGPAEGVHDS611RAPEVTWGPE621DEELWRKLSF631RHWPTLFNYY641NITLAKRYIS
651-700651LLPVIPVTLH661LNPREALEGR671HPQDGRSAWA681PQEPLPAGLW691ESGPKGPGGT
701-750701QTHGDITLYK711VAALGLAAGI721VLVLLLLCLY731RVLCPRNYGQ741PGGGPGRRRR
751-800751GELPCDDYGY761APPETEIVPL771VLRGHLMDIE781CLASDGMLLV791SCCLAGQVCV
801-850801WDAQTGDCLT811RIPRPGPRRD821SCGGGAFETQ831ENWERLSDGG841KASPEEPGDS
851-900851PPLRRRPRGP861PPPSLFGDQP871DLTCLIDTNF881SVQLPPEPTQ891PEPRHRVGCG
901-950901RSRDSGYDFS911RLVQRVYQEE921GLAAMRMPAL931RPPSPGPPLP941QASQEEGTAP
951-1000951EKGSPPLAWT961PSTAGSIWSL971ELQGNLIVVG981RSSGRLEVWD991AIEGVLCCSN
1001-10501001EEISSGITAL1011VFLDRRIVAA1021RLNGSLDFFS1031LETHTSLSPL1041QFRGTPGRGS
1051-11001051SPSSSVYSSS1061NTVTCHRTHT1071VPCAHQKPIT1081ALRAAAGRLV1091TGSQDHTLRV
1101-11501101FRLDDSCCLF1111TLKGHSGAIT1121AVYIDQTMVL1131ASGGQDGAIC1141LWDVLTGSRV
1151-12001151SQTFAHRGDV1161TSLTCTASCV1171ISSGLDDFIS1181IWDRSTGIKL1191YSIQQDLGCG
1201-12501201ASLGVISDNL1211LVTGGQGCVS1221FWDLNYGDLL1231QTVYLGKNSE1241AQPARQILVL
1251-12761251DNAAIVCNFG1261SELSLVYVPS1271VLEKLD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 22 | Sterol regulatory element-binding protein cleavage-activating protein | - | - |
Deep-Palm: 0.55
|
|
| 36 | Sterol regulatory element-binding protein cleavage-activating protein | - | - |
Deep-Palm: 0.97
|
|
| 40 | Sterol regulatory element-binding protein cleavage-activating protein |
Brain
(34200797)
| - |
Deep-Palm: 0.97
|
|
| 41 | Sterol regulatory element-binding protein cleavage-activating protein |
Brain
(34200797)
| - |
Deep-Palm: 0.97
|
|
| 147 | - | - | - |
Deep-Palm: 0.98
|
|
| 169 | - | - | - |
Deep-Palm: 0.99
|
|
| 264 | - | - | - |
Deep-Palm: 0.93
|
|
| 334 | - | - | - |
Deep-Palm: 0.97
|
|
| 418 | - | - | - |
Deep-Palm: 0.57
|
|
| 461 | - | - | - |
Deep-Palm: 0.98
|
|
| 728 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
|
| 734 | - | - | - |
Deep-Palm: 0.98
|
|
| 755 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.93
|
| 781 | - | - | - |
Deep-Palm: 0.94
|
|
| 792 | - | - | - |
Deep-Palm: 0.34
|
|
| 793 | - | - | - |
Deep-Palm: 0.40
|
|
| 799 | - | - | - |
Deep-Palm: 0.59
|
|
| 808 | - | - | - |
Deep-Palm: 0.83
|
|
| 822 | - | - | - |
Deep-Palm: 0.84
|
|
| 874 | - | - | - |
Deep-Palm: 0.71
|
|
| 899 | - | - | - |
Deep-Palm: 0.85
|
|
| 997 | - | - | - |
Deep-Palm: 0.90
|
|
| 998 | - | - | - |
Deep-Palm: 0.92
|
|
| 1065 | - | - | - |
Deep-Palm: 0.06
|
|
| 1073 | - | - | - |
Deep-Palm: 0.69
|
|
| 1107 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.92
|
|
| 1108 | - | - | - |
Deep-Palm: 0.88
|
|
| 1140 | - | - | - |
Deep-Palm: 0.80
|
|
| 1165 | - | - | - |
Deep-Palm: 0.66
|
|
| 1169 | - | - | - |
Deep-Palm: 0.62
|
|
| 1199 | - | - | - |
Deep-Palm: 0.94
|
|
| 1218 | - | - | - |
Deep-Palm: 0.70
|
|
| 1257 | - | - | - |
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.429
3
Liver
Specificity: 0.429
3/3 (100.0%)
2
Brain
Specificity: 0.286
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.143
1/1 (100.0%)
1
Testis
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.