Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6NVG1 | Lpcat4 | Lysophospholipid acyltransferase LPCAT4 (1-acylglycerol-3-phosphate O-acyltransferase … | Mus musculus (Mouse) | 524 aa |
Protein Details: Q6NVG1 (Lpcat4)
Protein Information
| Accession | Q6NVG1 |
|---|---|
| Protein Names | Lysophospholipid acyltransferase LPCAT4 (1-acylglycerol-3-phosphate O-acyltransferase 7) (1-AGP acyltransferase 7) (1-AGPAT 7) (1-acylglycerophosphocholine O-acyltransferase) (EC 2.3.1.23) (1-acylglycerophosphoserine O-acyltransferase) (EC 2.3.1.n6) (1-alkenylglycerophosphoethanolamine O-acyltransferase) (EC 2.3.1.121) (1-alkylglycerophosphocholine O-acetyltransferase) (EC 2.3.1.67) (Acyltransferase-like 3) (Lysophosphatidylcholine acyltransferase 4) (Lysophosphatidylethanolamine acyltransferase 2) (EC 2.3.1.n7) (Plasmalogen synthase) |
| Gene Symbol | Lpcat4 |
| Organism | Mus musculus (Mouse) |
| Length | 524 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 35358180 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSQGSPGAWA11PLDPTSGSSA21SPNPFVHELH31LSGLQRVKFC41LLGVLLAPIR
51-10051VLLAFIVLFL61LWPFAWLQVA71GLTEEQLQEP81ITGWRKTVCH91NGVLGLSRLL
101-150101FFLLGFLRIR111VRGQRASRLE121APVLVAAPHS131TFFDPIVLLP141CDLPKVVSRA
151-200151ENLSVPVIGA161LLRFNQAILV171SRHDPASRRR181VVEEVRRRAT191SGGKWPQVLF
201-250201FPEGTCSNKK211ALLKFKPGAF221IAGVPVQPVL231IRYPNSLDTT241SWAWRGPGVL
251-300251KVLWLTASQP261CSIVDVEFLP271VYQPSLEESK281DPTLYANNVQ291RVMAQALGIP
301-350301ATECEFVGSL311PVIVVGQLKV321ALEPQLWELA331KVLQKAGLSP341GFVDMGAEPG
351-400351RSRMISQEAF361AQQLQLSDPQ371TVAGAFSYFQ381QDAKGLVDFR391NVALALAALD
401-450401GGRSLEELTR411LAFELFAEEQ421AEGSDRLLYK431DGFSTILHLL441LGSPRPAATT
451-500451LHAELCQPGC461SQGLSLCQFQ471NFSLHDPLYG481KLFSAYLRPP491HKPRSTSQIP
501-524501NASSPSSPTA511LANGTVQAPK521QKGD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 40 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 89 | - | - | - |
Deep-Palm: 0.97
|
|
| 141 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.95
|
|
| 206 | SWISSPALM DBPTM CYSMODDB | Acyltransferase |
Forebrain
(28680068)
| - |
Deep-Palm: 0.98
|
| 261 | - | - | - |
Deep-Palm: 0.95
|
|
| 304 | - | - | - |
Deep-Palm: 0.94
|
|
| 456 | - | - | - |
Deep-Palm: 0.86
|
|
| 460 | - | - | - |
Deep-Palm: 0.75
|
|
| 467 | - | - | - |
Deep-Palm: 0.62
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Brain
Specificity: 0.333
2/2 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain tissue (Mass)
Specificity: 0.333
2/56 (3.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.