Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6NXX7 | Abce1 | ATP-binding cassette sub-family E member … | Mus musculus (Mouse) | 575 aa |
Protein Details: Q6NXX7 (Abce1)
Protein Information
| Accession | Q6NXX7 |
|---|---|
| Protein Names | ATP-binding cassette sub-family E member 1 (RNase L inhibitor) (Ribonuclease 4 inhibitor) |
| Gene Symbol | Abce1 |
| Organism | Mus musculus (Mouse) |
| Length | 575 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501CKKSCPVVRM11GKLCIEVTPQ21SKIAWISETL31CIGCGICIKK41CPFGALSIVN
51-10051LPSNLEKETT61HRYCANAFKL71HRLPIPRPGE81VLGLVGTNGI91GKSTALKILA
101-150101GKQKPNLGKY111DDPPDWQEIL121TYFRGSELQN131YFTKILEDDL141KAIIKPQYVD
151-200151QIPKAAKGTV161GSILDRKDET171KTQAIVCQQL181DLTHLKERNV191EDLSGGELQR
201-250201FACAVVCIQK211ADIFMFDEPS221SYLDVKQRLK231AAITIRSLIN241PDRYIIVVEH
251-300251DLSVLDYLSD261FICCLYGVPS271AYGVVTMPFS281VREGINIFLD291GYVPTENLRF
301-350301RDASLVFKVA311ETANEEEVKK321MCMYKYPGMK331KKMGEFELAI341VAGEFTDSEI
351-400351MVMLGENGTG361KTTFIRMLAG371RLKPDEGGEV381PVLNVSYKPQ391KISPKSTGSV
401-450401RQLLHEKIRD411AYTHPQFVTD421VMKPLQIENI431IDQEVQTLSG441GELQRVALAL
451-500451CLGKPADVYL461IDEPSAYLDS471EQRLMAARVV481KRFILHAKKT491AFVVEHDFIM
501-550501ATYLADRVIV511FDGVPSKNTV521ANSPQTLLAG531MNKFLSQLEI541TFRRDPNNYR
551-575551PRINKLNSIK561DVEQKKSGNY571FFLDD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 1 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.02
|
|
| 5 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.03
|
|
| 14 | RLI1 4Fe-4S ferredoxins | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.86
|
|
| 31 | 4Fe-4S ferredoxins 4Fe-4S ferredoxin-type, iron-sulphur binding domain RLI1 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.90
|
|
| 34 | 4Fe-4S ferredoxins 4Fe-4S ferredoxin-type, iron-sulphur binding domain RLI1 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.91
|
|
| 37 | RLI1 4Fe-4S ferredoxins 4Fe-4S ferredoxin-type, iron-sulphur binding domain | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.90
|
|
| 41 | RLI1 4Fe-4S ferredoxins | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.85
Deep-Palm: 0.95
|
|
| 64 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.85
|
|
| 177 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.75
Deep-Palm: 0.95
|
|
| 203 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.94
|
|
| 207 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.93
|
|
| 263 | - | - | - |
Deep-Palm: 0.91
|
|
| 264 | - | - | - |
Deep-Palm: 0.85
|
|
| 322 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.52
|
|
| 451 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.062
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.938
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.