Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6PA06 | Atl2 | Atlastin-2 (EC 3.6.5.-) | Mus musculus (Mouse) | 583 aa |
Protein Details: Q6PA06 (Atl2)
Protein Information
| Accession | Q6PA06 |
|---|---|
| Protein Names | Atlastin-2 (EC 3.6.5.-) |
| Gene Symbol | Atl2 |
| Organism | Mus musculus (Mouse) |
| Length | 583 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAEGDEAARR11QQPQQGLRRR21RQTSDSSVGV31NHVSSTTSLG41EDYEDDDLVN
51-10051SDEVMKKPCP61VQIVLAHEDD71HNFELDEEAL81EQILLQEHIR91DLNIVVVSVA
101-150101GAFRKGKSFL111LDFMLRYMYN121KDSQSWIGGN131NEPLTGFTWR141GGCERETTGI
151-200151QVWNEVFVID161RPNGTKVAVL171LMDTQGAFDS181QSTIKDCATV191FALSTMTSSV
201-250201QVYNLSQNIQ211EDDLQHLQLF221TEYGRLAMEE231IYQKPFQTLM241FLIRDWSYPY
251-300251EHSYGLEGGK261QFLEKRLQVK271QNQHEELQNV281RKHIHNCFSN291LGCFLLPHPG
301-350301LKVATNPSFD311GRLKDIDEDF321KRELRNLVPL331LLAPENLVEK341EISGSKVTCR
351-400351DLVEYFKAYI361KIYQGEELPH371PKSMLQATAE381ANNLAAVAGA391RDVYCKSMEQ
401-450401VCGGDKPYIA411PSDLERKHLD421LKEVALKQFR431SVKKMGGDEF441CRRYQDQLEA
451-500451EIEETYANFI461KHNDGKNIFY471AARTPATLFA481VMFAMYIISG491LTGFIGLNSI
501-550501AVLCNLVMGL511ALTSLCTWAY521VKYSGEFREI531GTMIDQIAET541LWEQVLKPLG
551-583551DNLMEENIRQ561SVTNSIKAGL571TDQVSHHARL581KTD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 59 | - | - | - |
Deep-Palm: 0.08
|
|
| 143 | - | - | - |
Deep-Palm: 0.52
|
|
| 187 | - | - | - |
Deep-Palm: 0.47
|
|
| 287 | - | - | - |
Deep-Palm: 0.39
|
|
| 293 | - | - | - |
Deep-Palm: 0.60
|
|
| 349 | - | - | - |
Deep-Palm: 0.86
|
|
| 395 | - | - | - |
Deep-Palm: 0.91
|
|
| 402 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.90
|
| 441 | - | - | - |
Deep-Palm: 0.77
|
|
| 504 | - | - | - |
Deep-Palm: 0.95
|
|
| 516 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.667
6/6 (100.0%)
2
Testis
Specificity: 0.222
2/2 (100.0%)
1
Brain
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.