Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6PAM0 | Prkab2 | 5'-AMP-activated protein kinase subunit beta-2 … | Mus musculus (Mouse) | 271 aa |
Protein Details: Q6PAM0 (Prkab2)
Protein Information
| Accession | Q6PAM0 |
|---|---|
| Protein Names | 5'-AMP-activated protein kinase subunit beta-2 (AMPK subunit beta-2) |
| Gene Symbol | Prkab2 |
| Organism | Mus musculus (Mouse) |
| Length | 271 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGNTTSERVS11GERHGAKAAR21AEGGGHGPGK31EHKIMVGSTD41DPSVFSLPDS
51-10051KLPGDKEFVP61WQQDLDDSVK71PAQQARPTVI81RWSEGGKEVF91ISGSFNNWST
101-150101KIPLIKSHND111FVAILDLPEG121EHQYKFFVDG131QWVHDPSEPV141VTSQLGTINN
151-200151LIHVKKSDFE161VFDALKLDSM171ESSETSCRDL181SSSPPGPYGQ191EMYVFRSEER
201-250201FKSPPILPPH211LLQVILNKDT221NISCDPALLP231EPNHVMLNHL241YALSIKDSVM
251-271251VLSATHRYKK261KYVTTLLYKP271I
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 177 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.83
|
|
| 224 | - | - | - |
Deep-Palm: 0.35
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Brain tissue (Mass)
Specificity: 0.833
5/56 (8.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.