Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6PB66 | Lrpprc | Leucine-rich PPR motif-containing protein, mitochondrial … | Mus musculus (Mouse) | 1392 aa |
Protein Details: Q6PB66 (Lrpprc)
Protein Information
| Accession | Q6PB66 |
|---|---|
| Protein Names | Leucine-rich PPR motif-containing protein, mitochondrial (130 kDa leucine-rich protein) (LRP 130) (mLRP130) |
| Gene Symbol | Lrpprc |
| Organism | Mus musculus (Mouse) |
| Length | 1392 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAALLRPARW11LLGAAAAPRL21PLSLRLPAGV31PGRLSSVVRV41AAVGSRPAAG
51-10051ERLSQARLYA61IVAEKRDLQE71EPAPVRKNSS81QFDWALMRLD91NSVRRTGRIT
101-150101KGLLQRVFES111TCSSGSPGSN121QALLLLRSCG131SLLPELSLAE141RTEFAHKIWD
151-200151KLQQLGVVYD161VSHYNALLKV171YLQNEYKFSP181TDFLAKMEGA191NIQPNRVTYQ
201-250201RLIAAYCNVG211DIEGASKILG221FMKTKDLPIT231EAVFSALVTG241HARAGDMENA
251-300251ENILTVMKQA261GIEPGPDTYL271ALLNAHAERG281DIGQVRQILE291KVEKSDHYFM
301-350301DRDFLQVIFS311FSKAGYPQYV321SEILEKITYE331RRSIPDAMNL341ILFLATEKLE
351-400351DTAFQVLLAL361PLSKDESSDN371FGSFFLRHCV381TLDLPPEKLI391DYCRRLRDAK
401-450401LHSSSLQFTL411HCALQANRTA421LAKAVMEALR431EEGFPIRPHY441FWPLLAGHQK
451-500451TKNVQGIIDI461LKIMNKVGVD471PDQETYINYV481FPCFDSAQSV491RAALQENECL
501-550501LASSTFAQAE511VKNEAINGNL521QNILSFLESN531TLPFSFSSLR541NSLILGFRRS
551-600551MNIDLWSKIT561ELLYKDERYC571SKPPGPAEAV581GYFLYNLIDS591MSDSEVQAKE
601-650601ERLRQYFHQL611QEMNVKVPEN621IYKGICNLLN631TYHVPELIKD641IKVLVDREKV
651-700651DSQKTSQVTS661SDLESTLEKL671KAEGQPVGSA681LKQLLLLLCS691EENMQKALEV
701-750701KAKYESDMVI711GGYAALINLC721CRHDNAEDAW731NLKQEVDRLD741ASAILDTAKY
751-800751VALVKVLGKH761SRLQDAINIL771KEMKEKDVVI781KDATVLSFFH791ILNGAALRGE
801-850801IETVKQLHEA811IVTLGLAKPS821SNISFPLVTV831HLEKGDLPAA841LEASIACHKK
851-900851YKVLPRIHDV861LCKLVEKGET871DLIQKAMDFV881SQEQGEMTML891YDLFFAFLQT
901-950901GNYKEAKKII911ETPGIRARPT921RLQWFCDRCI931ASNQVEALEK941LVELTEKLFE
951-1000951CDRDQMYYNL961LKLYKISSDW971QRADAAWTKM981QEENIIPRER991TLRLLAEILK
1001-10501001TSNQEVPFDV1011PELWFGDDRP1021SLSPSSRSAG1031EDVTEKTLLS1041NCKLKKSKDA
1051-11001051YNIFLKAEKQ1061NVVFSSETYS1071TLIGLLLSKD1081DFTQAMHVKD1091FAETHIKGFT
1101-11501101LNDAANSLLI1111IRQVRRDYLK1121GALATLRAAL1131DLKQVPSQIA1141VTRLIQALAL
1151-12001151KGDVESIEAI1161QRMVAGLDTI1171GLSKMVFINN1181IALAQMKNNK1191LDAAIENIEH
1201-12501201LLASENQAIE1211PQYFGLSYLF1221RKVIEEQMEP1231ALEKLSIMSE1241RMANQFALYK
1251-13001251PVTDLFLQLV1261DSGKVDEARA1271LLERCGAIAE1281QSSLLSVFCL1291RTSQKPKKAP
1301-13501301VLKTLLELIP1311ELRDNDKVYS1321CSMKSYALDK1331DVASAKALYE1341YLTAKNLKLD
1351-13921351DLFLKRYAAL1361LKDVGEPVPF1371PEPPESFAFY1381IKQLKEARES1391PS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 112 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 129 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.99
|
| 207 | SWISSPALM DBPTM CYSMODDB | PPR repeat family |
Liver
(28526873)
| - |
Deep-Palm: 0.70
|
| 379 | - | - | - |
Deep-Palm: 0.73
|
|
| 393 | - | - | - |
Deep-Palm: 0.95
|
|
| 412 | - | - | - |
Deep-Palm: 0.95
|
|
| 483 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.50
|
|
| 499 | - | - | - |
Deep-Palm: 0.96
|
|
| 570 | - | - | - |
Deep-Palm: 0.94
|
|
| 626 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.33
|
| 689 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.98
|
|
| 720 | - | - | - |
Deep-Palm: 0.28
|
|
| 721 | - | - | - |
Deep-Palm: 0.27
|
|
| 847 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 862 | - | - | - |
Deep-Palm: 0.94
|
|
| 926 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.85
|
|
| 929 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 951 | - | - | - |
Deep-Palm: 0.89
|
|
| 1042 | - |
MLE
(39008777)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.97
|
|
| 1275 | - | - | - |
Deep-Palm: 0.98
|
|
| 1289 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.93
|
|
| 1321 | - | - | - |
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.286
6/6 (100.0%)
2
Testis
Specificity: 0.095
2/2 (100.0%)
1
Brain
Specificity: 0.048
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.571
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.