Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6PJF5 | RHBDF2 | Inactive rhomboid protein 2 (iRhom2) … | Homo sapiens (Human) | 856 aa |
Protein Details: Q6PJF5 (RHBDF2)
Protein Information
| Accession | Q6PJF5 |
|---|---|
| Protein Names | Inactive rhomboid protein 2 (iRhom2) (Rhomboid 5 homolog 2) (Rhomboid family member 2) (Rhomboid veinlet-like protein 5) (Rhomboid veinlet-like protein 6) |
| Gene Symbol | RHBDF2 |
| Organism | Homo sapiens (Human) |
| Length | 856 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | PTMDSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASADKNGGS11VSSVSSSRLQ21SRKPPNLSIT31IPPPEKETQA41PGEQDSMLPE
51-10051GFQNRRLKKS61QPRTWAAHTT71ACPPSFLPKR81KNPAYLKSVS91LQEPRSRWQE
101-150101SSEKRPGFRR111QASLSQSIRK121GAAQWFGVSG131DWEGQRQQWQ141RRSLHHCSMR
151-200151YGRLKASCQR161DLELPSQEAP171SFQGTESPKP181CKMPKIVDPL191ARGRAFRHPE
201-250201EMDRPHAPHP211PLTPGVLSLT221SFTSVRSGYS231HLPRRKRMSV241AHMSLQAAAA
251-300251LLKGRSVLDA261TGQRCRVVKR271SFAFPSFLEE281DVVDGADTFD291SSFFSKEEMS
301-350301SMPDDVFESP311PLSASYFRGI321PHSASPVSPD331GVQIPLKEYG341RAPVPGPRRG
351-400351KRIASKVKHF361AFDRKKRHYG371LGVVGNWLNR381SYRRSISSTV391QRQLESFDSH
401-450401RPYFTYWLTF411VHVIITLLVI421CTYGIAPVGF431AQHVTTQLVL441RNKGVYESVK
451-500451YIQQENFWVG461PSSIDLIHLG471AKFSPCIRKD481GQIEQLVLRE491RDLERDSGCC
501-550501VQNDHSGCIQ511TQRKDCSETL521ATFVKWQDDT531GPPMDKSDLG541QKRTSGAVCH
551-600551QDPRTCEEPA561SSGAHIWPDD571ITKWPICTEQ581ARSNHTGFLH591MDCEIKGRPC
601-650601CIGTKGSCEI611TTREYCEFMH621GYFHEEATLC631SQVHCLDKVC641GLLPFLNPEV
651-700651PDQFYRLWLS661LFLHAGVVHC671LVSVVFQMTI681LRDLEKLAGW691HRIAIIFILS
701-750701GITGNLASAI711FLPYRAEVGP721AGSQFGLLAC731LFVELFQSWP741LLERPWKAFL
751-800751NLSAIVLFLF761ICGLLPWIDN771IAHIFGFLSG781LLLAFAFLPY791ITFGTSDKYR
801-850801KRALILVSLL811AFAGLFAALV821LWLYIYPINW831PWIEHLTCFP841FTSRFCEKYE
851-856851LDQVLH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 72 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.89
|
|
| 147 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.41
|
|
| 158 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.86
|
|
| 181 | - | - | - |
Deep-Palm: 0.89
|
|
| 265 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.98
|
|
| 421 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.13
|
|
| 476 | PTMD SWISSPALM | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.93
|
| 499 | - | - | - |
Deep-Palm: 0.91
|
|
| 500 | - | - | - |
Deep-Palm: 0.93
|
|
| 508 | - | - | - |
Deep-Palm: 0.21
|
|
| 516 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.11
|
|
| 549 | - | - | - |
Deep-Palm: 0.77
|
|
| 556 | - | - | - |
Deep-Palm: 0.20
|
|
| 577 | - | - | - |
Deep-Palm: 0.09
|
|
| 593 | - | - | - |
Deep-Palm: 0.15
|
|
| 600 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.12
|
|
| 601 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.10
|
|
| 608 | - | - | - |
Deep-Palm: 0.07
|
|
| 616 | - | - | - |
Deep-Palm: 0.03
|
|
| 630 | - | - | - |
Deep-Palm: 0.06
|
|
| 635 | - | - | - |
Deep-Palm: 0.44
|
|
| 640 | - | - | - |
Deep-Palm: 0.84
|
|
| 670 | - | - | - |
Deep-Palm: 0.79
|
|
| 730 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.95
|
|
| 762 | - | - | - |
Deep-Palm: 0.45
|
|
| 838 | - | - | - |
Deep-Palm: 0.11
|
|
| 846 | - | - | - |
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 119 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 119 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 132 | W → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 197 | R → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 234 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 234 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 328 | S → C | 0.002294 | SNP | Missense Mutation | OV |
| 499 | C → Lfs*188 | 0.003460 | INS | Frame Shift Ins | CESC |
| 556 | C → Y | 0.002288 | SNP | Missense Mutation | STAD |
| 600 | C → Afs*79 | 0.002033 | DEL | Frame Shift Del | LUSC |
| 608 | C → C | 0.017544 | SNP | Silent | UCS |
| 621 | G → C | 0.002506 | SNP | Missense Mutation | COAD |